KEGG   Malassezia restricta: MRET_0904
Entry
MRET_0904         CDS       T06113                                 
Name
(RefSeq) replication factor C subunit 3/5
  KO
K10756  replication factor C subunit 3/5
Organism
mrt  Malassezia restricta
Pathway
mrt03030  DNA replication
mrt03410  Base excision repair
mrt03420  Nucleotide excision repair
mrt03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MRET_0904
   03410 Base excision repair
    MRET_0904
   03420 Nucleotide excision repair
    MRET_0904
   03430 Mismatch repair
    MRET_0904
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mrt03032]
    MRET_0904
   03036 Chromosome and associated proteins [BR:mrt03036]
    MRET_0904
   03400 DNA repair and recombination proteins [BR:mrt03400]
    MRET_0904
DNA replication proteins [BR:mrt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    MRET_0904
  DNA Replication Termination Factors
   ELG1-RFC complex
    MRET_0904
Chromosome and associated proteins [BR:mrt03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    MRET_0904
DNA repair and recombination proteins [BR:mrt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     MRET_0904
  Check point factors
   HRAD17(Rad24)-RFC complex
    MRET_0904
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_30 RuvB_N AAA_assoc_2 AAA_24 AAA_11 AAA_16 AAA_22 AAA_5 AAA_14 AAA_lid_RFC1 ResIII nSTAND_NTPase5 DUF815 DEAD AAA_28 AAA_7 AAA_3 nSTAND3 ABC_tran SLFN-g3_helicase AAA_19 ATPase_2 RCF1-5-like_lid Mg_chelatase bpMoxR RNA_helicase AAA_25 AAA_18 AAA_23 FtsK_SpoIIIE MCM AAA_33 Thioredoxin_6
Other DBs
NCBI-GeneID: 38737670
NCBI-ProteinID: XP_027483515
LinkDB
Position
II:99485..100519
AA seq 344 aa
MADKGKGRDVGDAPRSSDALPWVEKYRPATLDEVLSHQHITSTLERFIDAHQLPHLLFYG
PPGTGKTSTIMALAARLYGTSYRSHVLELNASDDRGIDVVRGQIKAFASTRNMFSTQTDT
FKLVILDEADAMTQAAQAALRRVMEQYTRNVRFCIICNYVNKIIPAIQSRCTRFRFSPLD
RAQVERRIDSVIAAEHCRIDDRAKAAILQLSHGDMRRALNILQACDAACEPGSLIDEDSV
YTCTGHPHPHDIETAFHAMLEQEFTTAFHTVQALRIDKGMALPDLLTGMHDLVMSLELPP
HARVYILDQMAQIEYRLSTNASERIQLSALLASVKTTVDMATAS
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggcggacaagggcaagggacgcgacgtgggcgatgcgccgcgatcgagtgacgcgctg
ccgtgggtggaaaagtaccggcccgcgacgctcgatgaggtgctgtcgcaccagcacatt
acgtcgacgctcgagcggttcatcgacgcgcatcagctgccccatctcctcttctacggg
ccgcccggcaccggcaagacgtcgacgatcatggccctcgctgcgcgtctgtacggcacg
tcgtatcgcagtcatgtgctggagctgaatgcgtccgacgaccgcggcatcgacgtcgtc
cgcggccagatcaaggcgtttgcgagcacacgcaacatgttcagcacccagacggacacg
ttcaagctcgtcatcctcgacgaggccgatgccatgacgcaggccgcccaagcggcacta
cgccgcgtcatggagcagtacacacgcaacgtgcgcttctgcattatctgcaactacgtc
aacaaaatcatcccggccatccagagccggtgcacgcgcttccgcttctcgccgctcgat
cgcgcgcaggtcgagcgccgcatcgacagcgtcatcgccgccgagcactgccgcatcgac
gaccgcgccaaggccgccatcctccagctctcgcatggcgacatgcgccgcgcgctcaac
atcctgcaggcatgcgacgcggcctgcgagcccggcagcctcatcgacgaagacagcgtg
tacacatgcacgggacacccacatccacacgacatcgagacggccttccacgcgatgctc
gagcaggagttcacgaccgcctttcacaccgtccaagcgctgcgcatcgacaaaggcatg
gccctgcccgacctgctcacgggcatgcacgatctcgtcatgtccctcgagctcccacca
cacgcacgggtatacatcctcgatcagatggcgcagatcgagtaccgcctgagcacgaat
gcctccgaacgcatccagctctcggcgctcttggcgtcggtcaagaccaccgtcgacatg
gccaccgcctcatag

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