Malassezia restricta: MRET_0996
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Entry
MRET_0996 CDS
T06113
Name
(RefSeq) transcription initiation factor TFIIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
mrt
Malassezia restricta
Pathway
mrt03022
Basal transcription factors
mrt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MRET_0996
09124 Replication and repair
03420 Nucleotide excision repair
MRET_0996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_0996
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_0996
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MRET_0996
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MRET_0996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
38737762
NCBI-ProteinID:
XP_027483912
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All DBs
Position
II:258822..259898
Genome browser
AA seq
358 aa
AA seq
DB search
MAVGANETVRAYAETRAPANRGGHAPGYVSTRSMSVSASLALSDCLVVILDLDAYAWQHV
SPPTGDSTERADAAFETLQHVISAVLVFLNAYTAMQHGNGLVVYGAAAGTAHLLYSSLQA
GDSSDASSHDTHASACLPFKRMNDAVFHGMRAMLEAAHHGAGGSVGIVRALALALCHINR
ITTAMSEHATERRGAGATSFQHRILVLSATPDVSAQYVPMMNCIFSAQKQGIQVDVCKLL
GDETVFLRQACHLTGGHYYHVPRLDGLLQVLMTTFLPSRSIQASLMFPALDDVDFRAACF
CHRRNVDIGYVCSVCLSIFCEPRDTCLICHAAFMPSTLERLKDERIIAAQLRSSHTSA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggccgtcggcgcaaatgaaacggtgcgcgcgtacgccgagacgcgtgccccggcaaat
cgtggtggacacgctcctggctacgtctccacccgcagcatgtcggtgtcagcgtcgctg
gctttgtccgactgcctcgtggtgatcctagacctggatgcctatgcatggcagcatgtc
tcgcctcccacaggtgatagtacggagcgtgccgacgcggcattcgagacgctgcagcat
gtcatctctgcggtgctcgtgtttctcaacgcatacacagccatgcagcatgggaacggc
ctcgtcgtgtatggcgcggccgcaggcacggcccacctcctgtactcgagccttcaggct
ggcgatagcagcgacgcgtcgtcgcacgatacccacgccagtgcctgtttgccattcaag
cggatgaacgacgccgtgttccatggcatgcgcgccatgctagaggcggcccaccacggc
gccggtgggtcggtgggcatcgtacgtgcattggcccttgccttgtgtcacatcaaccgc
atcacaacggcgatgagtgagcacgctacggagaggcgtggtgctggcgccacgtccttt
cagcaccggatcctcgtgctgagtgccacgccagatgtgagcgcgcagtatgtgccgatg
atgaactgtatatttagtgcccagaaacagggcatccaggtggatgtctgcaaattgctg
ggcgacgagacggtctttttgcggcaggcttgccacctcacaggcggccactactatcat
gtcccgcgcctcgacggcctgttacaggtactcatgacgacgtttctgccatcgcgatcg
atccaggcatcgctcatgtttcctgccctggatgatgtggacttccgagcagcttgcttc
tgccatcgtcgcaatgtcgatatcgggtatgtgtgctcggtctgtttgagcatcttctgc
gagccacgcgacacgtgcttgatatgccatgcagcgttcatgccgtcgacgttggagcgg
ctcaaggacgagcgcatcattgcggcacagcttcgctcgtcgcatacaagtgcatga
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