KEGG   Malassezia restricta: MRET_1149
Entry
MRET_1149         CDS       T06113                                 
Name
(RefSeq) transcription elongation factor B, polypeptide 1
  KO
K03872  elongin-C
Organism
mrt  Malassezia restricta
Pathway
mrt04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MRET_1149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mrt04121]
    MRET_1149
   03400 DNA repair and recombination proteins [BR:mrt03400]
    MRET_1149
Ubiquitin system [BR:mrt04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     MRET_1149
   Cul5 complex
     MRET_1149
DNA repair and recombination proteins [BR:mrt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     MRET_1149
SSDB
Motif
Pfam: Skp1_POZ DUF1059
Other DBs
NCBI-GeneID: 38737915
NCBI-ProteinID: XP_027483836
LinkDB
Position
II:join(500228..500263,500293..500374,500406..500448,500476..500595,500626..500651,500694..500698)
AA seq 103 aa
MSSREWVTLLSDDGYKFIIDREWAMLSGTIRTMLSTDDGGFSEAESGICTLQIRGQVLEK
VVEYLQWHARYSHQSQYPIKEFESKIPPELALELLMAADFLEL
NT seq 312 nt   +upstreamnt  +downstreamnt
atgtcatcgcgcgagtgggtgacgttgcttagtgatgatgggtacaagtttattatagat
cgagaatgggccatgctcagcggaacaattcgcactatgttgtcaactgacgatggtggg
ttctctgaggcggagagtggcatatgcacgctgcaaattcgcggtcaagtgctggaaaaa
gtcgtcgagtatttacaatggcatgcccgatattcgcaccaatctcaataccctatcaag
gaattcgagtccaaaataccaccagaactcgctttggaactactcatggcagccgacttt
ttagaattatga

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