Malassezia restricta: MRET_1305
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Entry
MRET_1305 CDS
T06113
Name
(RefSeq) pre-mRNA-splicing factor RBM22/SLT11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_1305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_1305
Spliceosome [BR:
mrt03041
]
Complex B
Other components
Prp19-related factors
MRET_1305
Complex C
MRET_1305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH
RRM_occluded
ISP1_C
zf-CCCH_3
RRM_YTH1
RRM_1
zf-CCCH_12
zf-CCCH_4
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
38738071
NCBI-ProteinID:
XP_027483369
LinkDB
All DBs
Position
II:753625..754569
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AA seq
314 aa
AA seq
DB search
MSYGFLNKQGAASAGSSSADTPIVCETCLGPNPYVRMSKHHLGKECKVCGRPCTVFRWNP
GSGMRFKTTEICTTCAKIRHVCQSCILDLDYHLPTQVRDAALGTSVKIPMSDINRQYFVN
RMDALLDGASPEATKELVGPSRAGHEVLKKLARPEPDYQQLRPVVCSFYARGNCARGQAC
PYKHENASSLTPAPPSVPHHAPGHVDMPVLKKAAGAKALTAPPDERIRTLFFAGLPHNIN
QDELHTLLTTTMPALNKQKALASIQLVTSSHCAFVHFNTRRDAENMATLLANKVILQDHP
IRVAWGRRPPPSDT
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacggctttctaaacaagcagggagccgccagtgccggctcgtcgtcagcagac
acacctattgtatgtgaaacgtgtcttggtcccaatccgtacgtgcgaatgtccaaacac
catctagggaaagaatgcaaagtgtgtggcaggccatgcaccgtctttcggtggaatccc
ggtagtggtatgcgtttcaagaccacagaaatttgcaccacatgtgccaagattcgtcat
gtgtgccaatcatgcattctcgatctggactaccatttgccgacgcaggtgcgcgatgct
gcccttgggacgtcggtcaagatacccatgtctgacatcaaccgccagtattttgtaaat
cgtatggatgcattgctggacggtgcatcacctgaagctacaaaagagcttgtgggacca
tcgcgggcaggtcatgaggtcctgaagaagctcgcacgtcccgaacctgattaccagcaa
ttgcgaccggtcgtgtgctctttttatgcgcgtggtaactgtgctcggggccaagcatgt
ccctataagcacgagaatgcctcgtccctgacacctgctccaccatctgtgcctcatcac
gcgccagggcacgtcgatatgcctgtcctgaaaaaggctgctggtgccaaggctttgaca
gcgcctccggatgagcgcattcgcaccctttttttcgcaggcttgccacataatataaac
caggatgaactacatactctgctgactacaactatgcccgccctcaacaagcaaaaggca
ctcgcaagcatccaactcgtcacatcgtcacactgtgcttttgttcacttcaacacgcga
cgggatgcggaaaatatggcgacgctactcgccaacaaagtcattctgcaggatcatccc
attcgggtagcttggggccggcggcctccgccgtcagatacatag
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