Malassezia restricta: MRET_1317
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Entry
MRET_1317 CDS
T06113
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mrt04131
]
MRET_1317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrt04147
]
MRET_1317
Membrane trafficking [BR:
mrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
MRET_1317
Exosome [BR:
mrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
MRET_1317
Exosomal proteins of bladder cancer cells
MRET_1317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
38738083
NCBI-ProteinID:
XP_027483429
LinkDB
All DBs
Position
II:775568..779299
Genome browser
AA seq
1243 aa
AA seq
DB search
MQMLTKFESKSNRVKGIAFHQKLPLLAASLHNGSIQLWNYQTGTIYERLEDHEGPVRGVC
FHPTQPLLVSGGDDFKIKVWNHKTGKVLFTLHGHLDYVRSVFFHHEHPWIISASDDQTIR
IWNWQSRTCIAVLTGHNHYVMCAQFHPYEDLIVSASMDQTVRVWDFTTLKQKSTTAQPMS
LEDQIARANSTQMDLFANMDVVVKYVLEGHDRGVNWAAFHPALPLIVSASDDRQIKLWRM
SDTKAWEVDTCRGHYNNVSASLFHPHAELILSVSEDKTIRVWDMGKRIAVQTFRRENDRF
WVLTAHPHLNLFAAGHDSGLIVFKLERERPPFALHDHSLYYVRNKQVRHMDYNTGKDHAL
LSIRRLGNQYVQPRSLSFNPAERSVIVTSINGDVGVYDIAPLPHSPPAELGESGAVGRRG
QGSTALFVARNRLAVLQKSQQRVEIRDLLNQVVKTLMLPQPTNEIFYGGPSHLLLSTAMG
VQLYDTQQQTVTGEIAAPSVKYAVWSPDGARVALLSKHTITLTDKHFSSSHLIHETIRIK
SAAWDSNGVLLYSTLNHIKYALPQGDVGIIKTLEQPLYLTRVKGSTVYCLDRQACPRTVV
MDPTEYKFKLALLEGRYDEVLSIIRTSRLVGQAIIAYLQKKGFPEIALHFVQDKTTRFDL
AVECGNLDVALETAEAINVPEIWTRLGQAALRLGAHHIVERAYQKTKDFDQLSFLYLITG
NFEKLAKMTSIAERRGNVQSLYHNAVFNQDAVTQTRVLQGAGLGVLAYITAQRSGDSTWA
AEIAQESGLDADEAQSLAGIPVSTTAGLPPVVYPTSQQDWPLAAPTENFFDKELVAGTDG
GVIFEDNVVDAPSHDIDSWLEGDALVDDEEDAYGEPNADGGIVDLNEAEEAWDLDDGVVA
PAEEELGQQIAPLADVASLEGLTAGSAEDEHWLRNSPVAADLAAAGAFDTALQLLQRQAG
IVSFTPLEPWLWRCFVAARAIVPGAPGMSPLIVHLRRNNEASEGDLGKVLPASPLRLSYL
ETHHLASAYRAVSGNKLHDAEHEFRSLLHMLVLTPALNELEAQRILELIGECREYLIGIS
IELERRALAADAAQANEPAQVARIVELAALFTHVQMQPQHQMLALRIAMMEARRVGNLAM
AGHFARRLIELQPPAKVVQVAQQIVSLSDRQPRDAVQVSSYSVHESDYVICAGSHTLIPA
GGMNAVEDPLTGAKYLPEFRGSLCKVSHISEVGRLATGLRNLA
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgcagatgctaacaaagtttgagtcaaagtcaaatcgtgtgaaaggtatcgcctttcac
cagaagctaccgctgcttgcggcctcgttgcacaatggatcaatccaactttggaattac
caaacgggtacaatttatgaacgactggaagaccatgaaggtcctgttcgtggcgtctgc
ttccacccgacgcagcctcttttggtgagtggcggcgacgacttcaaaatcaaggtgtgg
aaccacaagaccggcaaggtcctgttcaccttacatggtcatttggattatgtgcgttcc
gtgttcttccatcacgaacacccatggattattagtgcatctgatgaccagaccatccgt
atttggaactggcaaagtcgcacctgtattgcggtactgaccggccacaaccactatgtg
atgtgtgctcaattccatccgtacgaagacctgattgtatcggcttcgatggaccagaca
gtgcgtgtatgggactttacaacactcaaacaaaagtccacgactgcgcagccaatgagc
cttgaagatcagattgcacgagcgaatagcacccaaatggacctctttgccaatatggac
gtcgtggtcaaatatgtgctggagggacacgaccgtggtgtgaactgggctgccttccac
cccgctcttccgcttattgtgtcggccagtgacgatcgtcaaatcaagctgtggcgcatg
tcggacacgaaggcctgggaagtcgatacatgccgcgggcattacaacaatgtatctgca
tccctctttcatccacatgctgaattgattctgtcggtctctgaagacaaaaccattcgc
gtatgggatatgggcaagcgcattgctgtccaaacgttccgccgtgagaacgaccggttt
tgggtccttacggctcatccgcacctgaatttgtttgctgctgggcatgacagtggtctg
attgtattcaaactagaacgcgagcgcccgccgtttgcattgcatgaccattcattgtat
tatgttcgcaacaagcaggtgcgccatatggactataatacaggcaaggaccatgcgctg
ctcagtatccgtcgccttggtaaccaatacgtccagccccgctctctgagctttaatcct
gcagagcgttccgtcatcgtgacgtcaatcaatggcgacgttggtgtgtatgatattgcg
ccgctcccgcattcgccgcctgccgagcttggtgagagtggcgccgtcggaagacgtggt
cagggctctacggcattgtttgttgcacgcaatcgcctggccgtcttgcaaaagagccag
cagcgtgtcgaaattcgtgatctattaaatcaagtcgtcaagaccttgatgctcccgcag
ccgactaacgagatcttttacggtggtccatcgcacttgttgcttagtacggcaatggga
gttcagctgtatgatacacaacaacaaacagtgaccggcgaaattgccgcgccaagcgtc
aagtatgcagtttggagccccgacggtgctcgtgtggctcttttgtcgaagcacaccatt
acgctgactgacaagcactttagctcgtcgcatctaatccatgagacgatccgtattaag
agcgcagcctgggactcgaatggcgtccttctgtacagcactctgaaccacattaagtat
gctttgccacagggcgatgtcggcattataaagacgctcgaacagccgctataccttaca
cgagtaaaaggttcgacggtgtactgccttgatcgtcaagcctgtccacgtacagtggtg
atggaccccaccgagtacaagttcaaactagcgctgctggaaggccgctacgatgaagtg
ctgagtattatccgcacgtcccgtctggtgggtcaggcaataattgcatatctgcaaaag
aagggcttccccgaaatcgctcttcattttgtgcaggataagacgacacgctttgattta
gcggtggagtgcggcaacctcgatgtggcgctcgaaacggcggaagctatcaacgtgccc
gagatctggacacgtctcggtcaagctgctctccgcctaggcgcgcatcacatcgtggag
cgtgcgtaccaaaaaaccaaagactttgaccagctgtcgttcctgtatcttataacaggc
aattttgaaaagctggctaagatgaccagcattgctgagcgccgtggaaatgtacaaagc
ctgtaccacaatgctgtgtttaaccaggatgccgtgacgcagacgcgcgtcttgcaaggc
gcgggccttggtgtgcttgcgtacattacggcgcagcgctctggagattcaacctgggcc
gccgagatcgctcaggaatcggggttggatgctgatgaagctcaatctctggctggcatt
cctgtgtcgacaacggctggactgccgcctgtggtatatccaacaagccaacaggactgg
ccacttgctgcgcccacagagaacttctttgacaaagagctcgtggctggtaccgacggc
ggcgtcattttcgaggacaatgtcgttgatgccccgtcgcatgatattgactcgtggctc
gagggcgacgcgctcgtggacgacgaagaggatgcatacggtgagccaaatgccgacggc
ggtatagttgacctaaacgaggcagaagaagcctgggatctcgatgacggtgttgtggcg
ccggcagaagaggagcttggtcagcagattgcgccattggcggatgttgcgtcgctagag
ggcctgaccgcgggcagcgctgaggatgagcactggcttcgcaactcgcctgtggctgca
gatctcgctgcggctggtgcgtttgatacagctctgcagctcttgcagcgtcaagcgggt
atcgtgtcattcacaccactcgagccatggctttggcgctgctttgttgctgctcgtgct
atcgtccctggtgcgccgggcatgtcacctcttattgtgcatttgcgacgcaataatgag
gcaagtgaaggcgatctcggcaaggtgctcccagcgtctccgttacgcttgtcgtacctg
gagacgcaccatctggcttctgcgtatcgtgcagtaagtggaaacaagctgcacgatgct
gagcatgagttccgttcgctactgcacatgctggtgctcacgcctgcactcaacgagctg
gaagctcagcgtatcttggagctcattggcgaatgccgggagtatttaattggtatttcg
atcgagctcgaacgccgtgcattggcggctgacgcggcgcaggccaacgagcccgcgcag
gtcgcccgcatcgtggaattggctgctctgtttacgcatgtgcagatgcagccacagcac
cagatgttggcgctgcgcattgccatgatggaagctcgtcgggtcggtaacctcgctatg
gctggccactttgctcgtcgacttattgagttgcagccacccgccaaggtcgtgcaggtg
gctcagcagatcgtgtccctctctgatcgccagccacgcgatgccgtgcaagtgtcttca
tactccgtgcacgagtctgactacgtcatttgtgctggcagccacacccttattcctgct
ggcggcatgaatgctgtcgaagaccccttgaccggcgccaagtatctgcctgagttccgt
ggctcgctgtgcaaggttagtcatattagtgaagtgggtcgtctagctacaggcctgcgt
aacctcgcgtaa
DBGET
integrated database retrieval system
