Malassezia restricta: MRET_1481
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Entry
MRET_1481 CDS
T06113
Name
(RefSeq) superkiller protein 3
KO
K12600
superkiller protein 3
Organism
mrt
Malassezia restricta
Pathway
mrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_1481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_1481
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
MRET_1481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_17
TPR_11
TPR_19
TPR_14
TPR_1
TPR_16
TPR_8
TPR_2
TPR_CcmH_CycH
BTAD
Motif
Other DBs
NCBI-GeneID:
38738247
NCBI-ProteinID:
XP_027483880
LinkDB
All DBs
Position
II:1053282..1057739
Genome browser
AA seq
1485 aa
AA seq
DB search
MSSNIDRQMLKQCREYILQEDWESALSKANSILEFHATNYHALVFKGLALLHMKKNVESE
KTYIQACKLDPNAPLAWQGLEKSYEMQKNWPKLMQLYEDWADAACAQSHTDVCATALSKW
VRIVREHGTPAEIIHALRQFLPTSKYYALLYTLPAPDQSAPFSTPYFEAQMLVHGHSLAN
SYELLQRCLDHDDKVIESTFEAQKNSIHAVKGGIDALRDHVYVQTMQKSLVPELYEYILS
HPYTDDATRRRIQSKQLQLYENLACRIPKRGPYADQDLREEMQGKAKALAHDLVLLRIPN
ETAWHIELEWSDYALSDLPFETLRTYLSVFPEDAAYVPTIRAILSLVRDPAFLRDSQPAE
DLLQLALLGVTKNKPSVLALRIATLLYLQDRDYETALQYLQRTDARLRRLCKSTGCHCKR
VSDDLSAQYAVVFAYYQAPTHHKAAIKHAKHALLSATAHQADILLARAYVHGSAGEWEKA
RDDYAQAKHCPLGPTHVDGRDISALWLNADVHAEAEAGYAQALYELGDLDAAQHAFESLL
AQHDEAAHPLGHAFRSRLWHGYGQCLWARGGEYRTLPEHAFRCFFQSIELCPTYAPAFTS
LGIFFQEAASPPDMSRACKSLQRAIELDMHEYEAARRLLEHYANEKAWDVVHTIARRVII
AECGVDIVQGSISGLQLTTHPWAWQAAGMMALMQRRAETAVAAFQVWIRAEPTDSDAWIS
LGEAYVESGRSVAGLKAYARARALHDEQETWYIDFLIADAQRRLGRYELTIKLLEGILED
RPTQVGVRVHLAETMLLQAQHLLSRSYSFRSVVMMHRAIHQAAQCIEHDARLRSAWKVVG
DACFALSRIDMPDAHPREHAVQRLIVLLDQLAVDHRMPTVRVVQSALLSQLTNGVLEPTV
YVECAVLVFKYMAYLCANDEHGCVLAWADLATSLCRMALMLRASNMSDEPDERAEQARRE
AIQCTKVAMKLRPMARLWLLLGHLHFAHSPMYAQHAYIKALDINKESPVAWTNLGFLYLS
VGDASLAENAFAQAQRIAPMLPTAWFGAALLHKTYTHSPKMYVRLFEQACLLSDCSLLEA
DYGLAEAVWTSSKRPPCTPVSPILARGPMIALHTYMANRPHDDTALHLCALLAEQLGYTT
LMARKMERAFTLVEGKFSETESAQHTLRFGIINMNLGRMRLASLDAQGAMDHLELALALL
EDLGDAPPMPSVRVWCHIGVACAQCLMGDYEEGMAGLRAVTQSLALSLLPDDQVPRIHGC
VGVLLARFGWHAGLSVSDLAADLDQALSVAPHDPLLITTRAALEAVHGRVMEYNGVLGKY
VTALPPHEQLTLRNTPQTAMLSMMHLAASFDLPTVLQHLARTYTRPDNTTTLLVMVAHMH
LRLAAGCRQNGTPIPRLPIESAHGEEQTDSGTLLDVARHVQQIVRARAVDEGAEHWATIQ
WILALAEYLTDASTPSCVPHAAKAVHLAPWDTHTWQALETVSPRA
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgaacattgaccggcagatgctgaagcagtgccgcgaatacatactacaagaa
gactgggagagcgcattatccaaagcgaacagtatccttgagttccatgccaccaactat
catgccctcgtctttaaaggcctggcccttttgcatatgaaaaagaatgtcgagtccgag
aagacctacatacaagcgtgcaagctcgacccaaacgcgccacttgcatggcagggtcta
gaaaaatcgtatgagatgcagaaaaactggcctaagcttatgcagctgtacgaagattgg
gctgatgcggcatgtgctcaaagccataccgacgtctgtgctacggccctgtctaaatgg
gtgcgcattgtgcgcgaacatggcacacccgcggagatcatccatgctttgcgccagttt
ttaccgacgtcgaaatactatgcgctgctatacacgctccctgcaccggatcaatctgcg
ccattctcgacgccgtattttgaggctcaaatgctggtgcacggccacagtcttgcgaat
tcgtatgaattactacaaaggtgtttagatcatgatgacaaggtgatcgaaagcacgttt
gaggcccagaaaaactccattcacgccgtgaagggtggaatcgatgcgctcagggaccat
gtatatgtacaaaccatgcaaaaatcgcttgtgcctgagctgtatgaatacattctctcg
catccatacaccgatgatgcgacgcggcgcaggattcaatcgaagcagctgcagctctac
gagaaccttgcgtgccgaataccaaagcgtggaccgtacgcagaccaggacttgcgcgag
gaaatgcaaggcaaggccaaggctttggcgcatgaccttgttttgctccgcattccgaat
gaaacagcatggcacattgagctagaatggagtgactatgcactttctgaccttccattc
gagaccttgaggacatacctgtctgtattccccgaggacgccgcctatgtgcccacgatt
cgtgccatactgagtctcgttcgcgaccccgcgttcctgcgagattctcagccagcggaa
gacctgctgcagctggccttgttgggcgtgacgaagaacaagccatcggtcctggccctg
cgtatcgcgacgctcctgtatctacaagaccgcgactacgaaacggcgcttcaatacctg
cagcgtacggatgcgcgcctacgcaggctctgtaaaagcacgggctgccattgcaagcgt
gtaagcgacgacttgtcagcgcagtacgctgttgtattcgcctattatcaagcgcctacg
caccataaggcggcgatcaagcatgccaagcatgccctgctctccgctacggcgcatcaa
gccgatattttgttggcccgcgcctacgtccacggcagcgcaggagaatgggagaaagct
cgggacgattatgcacaggccaagcattgtcccctggggcccacgcatgtcgatggccga
gatatttcggccctctggctcaacgccgacgtgcatgctgaagctgaagctggttacgct
caggcgctgtatgagttgggcgacttggatgccgctcagcacgcgttcgagtctctgctc
gcgcagcacgacgaggctgcacatccgctgggtcatgcgtttcgttcgcggctgtggcat
ggctatggtcagtgcttgtgggcgcgcggtggtgagtatcggacgctgccagagcatgct
ttccgctgcttcttccagagtattgagctgtgtccgacctatgcacccgcgtttacgtcg
ctcggcattttcttccaggaagcggcttcaccgcctgatatgtcgcgtgcgtgcaagagt
ctgcagcgagcgattgagcttgacatgcacgagtacgaagcggcgaggcgcctactcgag
cactatgcgaatgaaaaagcctgggatgtcgtgcatacgattgctcggcgagtcatcata
gccgagtgcggtgtggacatcgtgcaaggctctatatcgggcctacagctgacgacgcat
ccgtgggcatggcaggcagcgggcatgatggcgcttatgcagcgtcgggcggagacggct
gtggctgccttccaggtctggatccgtgctgagccaacggattccgatgcatggattagt
ctgggtgaggcgtatgtcgagtcggggcgttcggtggccggcctgaaggcatatgcacgc
gcacgggcgctgcatgacgagcaggaaacgtggtacattgactttctgattgccgatgca
cagaggcggttgggacgctacgagctgactatcaagctgctggaaggcattctagaagac
cgaccaacccaggtcggtgtccgtgtccacctggccgagacgatgctgctgcaggctcag
cacctgctgtcccgcagctacagtttccgcagcgttgtcatgatgcatcgtgcgatccat
caggcggcgcagtgcatcgagcacgacgcgcggctgcgctcggcatggaaggtcgtgggc
gatgcatgctttgctctctcgcgcatcgacatgcctgatgcgcatccgcgcgaacatgcg
gtgcagcgcctcatcgttctgcttgaccaactggccgtggaccatcgcatgccgaccgtg
cgagtcgtgcagtcggcgctgctgtcgcagctcacaaatggcgtcttggagcctactgtg
tacgtcgaatgcgcggtgctggtgttcaagtacatggcgtatttgtgtgctaacgatgag
catggctgcgtgctcgcgtgggccgatctcgctacgtcgctgtgtcgcatggcattgatg
ctgcgcgcctcgaacatgtccgacgagccggacgagcgtgcggaacaggcacgccgcgag
gcgatccagtgcaccaaggtggccatgaagctgcgtcctatggcacgcctctggctgttg
ctgggccacctgcactttgcgcacagccccatgtatgctcagcacgcctacatcaaagcg
ctcgatatcaacaaggagagtccggtggcatggaccaatctgggcttcctgtacctgagt
gtgggtgacgccagcctggccgaaaacgcgtttgcacaggcgcagcgcatcgcaccgatg
ctgcccactgcctggttcggcgcggccctattacacaagacgtacacgcacagtcccaag
atgtatgtccgcctgttcgagcaggcgtgcttgctgtcggactgctcgctgttggaggcc
gactatggccttgccgaggccgtatggacgtcgtctaagcggccgccctgcacgcccgta
tcgccgatcctggcgcgtggaccgatgattgcgctgcacacgtacatggcgaaccgcccg
catgacgataccgcgctgcatctgtgtgccttgctggccgagcagctgggctacacgact
ctcatggcccgcaaaatggagcgtgcgttcacgctggtcgaaggcaagttcagcgagact
gagtcggcgcagcacacactgcgctttggcattatcaacatgaatctgggacgcatgcgt
ctcgcgagtctcgatgcacagggcgccatggaccatctcgagctggcgctggcgttgctc
gaagatttgggagatgcgccgcccatgccgtccgtgcgtgtctggtgccacattggcgtg
gcgtgtgcgcagtgcttgatgggcgactatgaggagggcatggccggtctgcgggctgtt
acccagtcccttgctctgtccctcttgcctgacgaccaagtgccgcggatccacggctgc
gttggcgtgctgctcgcgcgcttcggctggcacgctggcttgtctgtctctgatctcgct
gcggacctggatcaggccctgtccgtggcaccccatgacccgcttcttattacgactcgt
gcggccctcgaagccgtgcatggccgcgtgatggaatacaatggcgtgctgggcaagtac
gtcacggctctaccaccgcatgaacagctcacgctgcgcaacacgccgcagacggcgatg
ctgagcatgatgcatctcgctgcttcctttgacttgccgactgtcctgcagcatctcgca
cggacgtatacacgccccgataataccacaacgctgctcgtgatggtcgcacatatgcac
ctgcgcctcgcagcaggctgtcggcagaatggcacgcccatcccacgtcttccgatcgag
agcgcccacggcgaagagcagacggacagcggtaccttgctggatgtggcacgccacgtg
cagcagatcgtcagggcccgcgctgtggacgaaggcgccgaacactgggccacgatccag
tggatcctcgccctcgccgaatacctcacagacgcatcaacgccatcctgcgtacctcat
gccgccaaggccgtgcacctcgccccttgggacacacatacgtggcaggcgctcgagacg
gtgtcaccacgtgcttag
DBGET
integrated database retrieval system
