Malassezia restricta: MRET_1486
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Entry
MRET_1486 CDS
T06113
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
mrt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_1486
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MRET_1486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_1486
04121 Ubiquitin system [BR:
mrt04121
]
MRET_1486
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_1486
Enzymes [BR:
mrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
MRET_1486
Spliceosome [BR:
mrt03041
]
Complex B
Other components
Prp19 complex
MRET_1486
Complex C
Prp19-CDC5 complex
MRET_1486
Ubiquitin system [BR:
mrt04121
]
Ubiquitin ligases (E3)
U-box type E3
MRET_1486
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
MRET_1486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
U-box
Motif
Other DBs
NCBI-GeneID:
38738252
NCBI-ProteinID:
XP_027483873
LinkDB
All DBs
Position
II:join(1063214..1063226,1063254..1063351,1063388..1064839)
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AA seq
520 aa
AA seq
DB search
MFCGISGEAPKEPVVCKSNGILYEKRLIEQYVEEHGKDPVTNEPLSLDDILPVKSSPRTA
FPRPPTHSSVPSLLMALQNEYDAIVFETLELRKQYDTVRQDLANALYTNDASMRVIARLM
KERDEAREALSSVHTSLGMPSSSGAHEDVEMTQAANPTMNSVTSLPVNVMEQIDSTAAAL
TKDRRARIKRGGSEGYPTSASAASLQAQSPIPSEHHASSPGIAAIDTSADGALVLTGGKD
ASVHVLDRTANKAVAKLEGHTKPVTSVVFSGRSNPAAGDSAKEAPTPLYAASASDDGTVR
IWRCNDKGQYELAHTIASTTVTGLSVHPTDSLLGSASRDGSWSIYSLETGECLLHVPAAN
ATDEQGAGFVYESFAFHPDGQLAATGTSDGVIRIWDVKQGQQSAVFRGHEGAVHTLDFSQ
NGYLLAAASRGAQHVKIWDLRKLDVTRVVDADATIQEVRFDPTAQLLAVVTAMNVRVFGG
KSLELCATLDVNNGLCAQWCPNDGALLIGAQDCNVGVFSL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttctgtgggatctctggcgaagctcctaaagagccggtggtgtgcaagtcgaatggg
attttatacgaaaaacggctcattgagcaatatgtggaagagcatggcaaggacccagtc
actaatgagcctctttcgctggatgatatcttgccagtaaagtcatcgccgagaactgca
tttccgcggccgcccacacactcgtctgtcccttcgctccttatggctcttcagaatgag
tacgacgcgattgtcttcgagacattggagttgcggaaacagtacgacacagtccgtcag
gatctagcgaatgctctgtatacaaacgatgcaagcatgcgagtgattgcacgtttgatg
aaagaacgcgatgaagcacgtgaagcactttcgagtgtacacacgtctctgggtatgcct
tcgtcgtctggtgctcatgaggatgttgagatgacacaggccgccaatcccaccatgaat
tcagtgacttccctgcccgtcaatgtaatggagcaaattgactccacggcagctgcactt
acaaaggaccgccgcgcacgtatcaagcgtggtggatcggaagggtaccccacatctgcg
tctgccgcctcacttcaagcacaatcgccaatcccctcggaacaccatgcttcgtctcca
ggtattgcagcgatcgatacaagcgcagatggagcgcttgttctcacgggcggtaaggat
gcgagtgtacacgtgctcgatcgcactgcgaacaaggctgtggccaagctcgaaggccat
acaaagcctgtcacatccgtggtattttccggccgcagtaatcctgctgctggagattct
gccaaagaagcgccaactcccttgtacgctgcgagtgcgagcgacgatggcactgtgcgc
atctggcgatgcaacgacaaaggccagtacgagctggcgcacaccattgcaagtaccacg
gtcacgggtctgagtgtccatcctactgactctctgctcggaagtgccagtcgggatgga
tcatggtcgatctactcgctcgagacgggcgagtgcctattgcatgtgcctgcagcgaac
gccaccgacgagcaaggtgctggctttgtgtatgagtcgttcgctttccaccctgatgga
caactggccgcaacaggcacttctgacggcgtcattcgcatttgggatgtcaagcaaggc
cagcagagcgccgtgttccgtggtcatgaaggtgccgtccatacccttgacttttcgcag
aatggctacttgcttgcagcggcctcgcgcggggcccagcatgttaagatctgggatcta
cggaagctagatgtcacgcgcgtggttgatgcggacgcgaccattcaggaggtccgtttt
gatcctacggcacagctattggctgttgtgacggcaatgaatgtccgtgtctttggcggc
aagtcgctggaattgtgtgccacgctcgacgtgaacaatggcctatgtgctcaatggtgc
cccaatgatggtgcgcttcttattggtgcacaggattgtaacgttggcgtcttttcgttg
tag
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