Malassezia restricta: MRET_1493
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Entry
MRET_1493 CDS
T06113
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
mrt
Malassezia restricta
Pathway
mrt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MRET_1493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_1493
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_1493
Enzymes [BR:
mrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
MRET_1493
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MRET_1493
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
MRET_1493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
38738259
NCBI-ProteinID:
XP_027483527
LinkDB
All DBs
Position
II:complement(join(1075251..1075471,1075501..1075784,1075810..1075904))
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AA seq
199 aa
AA seq
DB search
MAADPQRHGHVAFCVVCASNQNRSMSAHAVLKEAGFQVTSCGTGSAVRLPGPSIDKPNIY
AFGTPYDTMYQDLLRKDPRLYEANGLLPMLDRNRHIKTAPERWQECRRVSDVVITCEERC
FDSVCEDLLSRRHELNRSVHVINVEIKDNHEEAKKASSAFLALAEAIEQARDIDEDIDAI
LERQQEQFAYPLLHSVAYY
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagatcctcaacggcatggtcatgttgcattttgtgttgtctgtgcaagcaat
caaaatcgctccatgtcagcacatgccgtgctcaaggaggccggatttcaagtgacgtca
tgtggcacggggtcagcggtgcgactgcctgggccatctatcgataaacctaacatttac
gcattcggaacgccatacgacaccatgtaccaggatcttttgaggaaagatccccggcta
tacgaagccaacgggctgttaccgatgctcgatcggaatcggcacataaaaacggctcca
gagcggtggcaggagtgtcgtagggtttccgatgtggtcattacttgtgaagagcggtgc
ttcgatagcgtttgtgaagatttgctgagccgacggcatgaactgaatcgctccgtccac
gtaattaatgtcgagatcaaggataatcatgaagaagcaaaaaaagcctccagtgcgttt
cttgcccttgcagaggctatcgagcaagcccgtgatattgacgaagacatcgacgccatt
ctggagaggcaacaagaacaatttgcctatcctctgctacatagtgtagcgtattactga
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