KEGG   Malassezia restricta: MRET_1500
Entry
MRET_1500         CDS       T06113                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
mrt  Malassezia restricta
Pathway
mrt03020  RNA polymerase
mrt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    MRET_1500
  09124 Replication and repair
   03420 Nucleotide excision repair
    MRET_1500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mrt03021]
    MRET_1500
   03400 DNA repair and recombination proteins [BR:mrt03400]
    MRET_1500
Transcription machinery [BR:mrt03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     MRET_1500
DNA repair and recombination proteins [BR:mrt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      MRET_1500
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 38738266
NCBI-ProteinID: XP_027483600
LinkDB
Position
II:join(1084938..1085019,1085047..1085131,1085156..1085374,1085400..1085472)
AA seq 152 aa
MSGTPAFKRLRRGAVEVEDASTGKLGPEFQDAGCLLNSEVHLFFSRPGEASEGLSSVTQK
TKEYVDDFSRFKDQSTIREVRALLIKHAAQPDMDEADEHKGLQLSQFEMAQLANLSITDI
DEARTLIPTLATKDETQLESLLHELSAIRSFA
NT seq 459 nt   +upstreamnt  +downstreamnt
atgtcgggaacgccagcgttcaagcgtcttcgccgcggtgccgttgaggtagaggatgca
agcacgggcaaattaggacctgaatttcaggatgcaggatgcctgctcaactcggaagtg
catctcttcttttctcgacctggcgaggcgtcggaaggtctttcttctgtcacgcaaaaa
accaaggaatatgtcgacgatttcagcaggttcaaggaccagtctacgattcgagaagtg
cgcgccttgctcatcaagcatgcggcgcagccagacatggacgaggccgacgagcacaaa
ggtctgcaactgtcacaatttgagatggcgcaactcgccaacctttccatcacagatatc
gacgaggcacgtactctgattcccacactcgctaccaaggacgaaacgcagctggaatcc
ctacttcatgaactctctgcgattcgttcgttcgcctaa

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