Malassezia restricta: MRET_1550
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Entry
MRET_1550 CDS
T06113
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_1550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_1550
Spliceosome [BR:
mrt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MRET_1550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
38738316
NCBI-ProteinID:
XP_027483887
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Position
II:join(1180102..1180401,1180426..1180560,1180586..1181642,1181670..1181812)
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AA seq
544 aa
AA seq
DB search
MSNSLADELLADVAEGESNAMDNDKEQYSSILYNEESSHAGPDESVRADTSMQYVDESHA
HGASQPGNELESLQNNDASNTNIRSISKLYENDTLSELLKVIEQRKAQPPTVITGALEGS
EEYFLIIRANSTALEIDHEMLALYKFIREHYAPRFPELETLVLNPWEFIQAVLILGNKKD
LVTAGLEGILPQGTVVVISMTASTTTGQPLAAEEWQRIQDACGMVQSLEDARAKILDYVE
SRMSLLAPNLSALLGTRVATKLVGSAGGLASLARIPSCNMHLLGASKSGSSALSSIHGGS
TRYSGYLAQCTLIVQTPEEYRTQALRMVSAKASLAARVDAGGSSGSRQGEYGTALYQEVE
RKIEKLLEPPPAKLVKALPVPNEGGRKQRRGGRRARKFREMHGLTELRKMQNRIEFGKEE
EEASAFDETMGLGMINTKASGKIRASVANASSKARMSKANKDRLATLNRPKLSLQSLAPA
ESTSSGTASSLSFTPVQGIELVDPSRQKRVEEANAKWFREGQFSLVPGASKSSAQMPPSS
QPNT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagtctagcagatgaattgctggctgacgtggctgagggagagtcaaatgca
atggacaacgataaggaacaatactcttctattctgtataatgaagaatccagtcacgcg
ggtcctgatgaatcagtgagggcagatacctcgatgcaatatgtggatgaatcgcatgcg
cacggggcaagtcagcctgggaatgagctagagtcacttcaaaataatgatgcttcaaat
acgaatatacgatctatttcaaagctgtatgaaaacgataccctgtcagagcttctcaag
gtgattgagcagcgcaaggcccaacctccaacagtcattacgggtgcactggaaggctca
gaagagtattttttgatcattcgagccaacagtacggctctagagatcgatcatgaaatg
ttggccctttataagttcattcgcgaacattacgctccgcgatttccagagctcgaaaca
cttgtattgaatccttgggaatttattcaggcagtccttattttggggaataagaaagac
ctcgtgacagcgggtttggagggcatcctgccacaaggcaccgtagtcgtgatcagcatg
actgcttctaccaccacgggacagcctctcgcagctgaggagtggcaacgcattcaggac
gcatgtggtatggtgcaatcactcgaggacgctcgtgccaagattctggactatgtggaa
tcgcgcatgtcgctattagcaccaaacctctctgctttgcttggaactcgagtggcgacc
aagttggtgggctccgctggtggattagcatcacttgccagaattccttcttgcaatatg
cacctacttggtgcatctaaatcgggcagctcggccctttcttctattcatggtggatct
acgcgttattctggctacctcgcacaatgcacgctcattgtacaaacgcctgaagaatac
cgaactcaagcgctccgtatggtcagcgccaaggcatctcttgctgctcgtgtagacgca
ggaggctcttctggttctcgtcaaggagaatatggaacggctttgtatcaagaagttgaa
cgaaaaattgaaaagctgttggagccacctcccgccaagcttgtgaaagcattgccggtg
ccgaacgaaggcgggcgcaaacagcgacgtggtggacgacgtgctcgtaagttccgtgaa
atgcacgggctcacagagctgcgaaagatgcagaaccggatagaattcggcaaggaggaa
gaagaagctagcgcctttgacgaaacgatgggacttggtatgatcaataccaaggccagc
ggtaagattcgtgcgtctgtggcgaatgcatcgtccaaggcacgcatgtccaaagcaaac
aaggaccggcttgcaacgctgaatcgtccgaagttatcgttgcaaagtttggcaccagct
gaatcgacgtcgtctggcacagcgtcctcgttgtccttcacgcccgtgcaaggtattgag
ctcgttgatccgtctcgacaaaaaagggtggaggaagctaatgccaaatggttccgcgag
ggacaattctcgctggtgcctggcgcctccaaatcctcggctcagatgccaccatcatca
caaccaaacacatag
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