Malassezia restricta: MRET_1609
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Entry
MRET_1609 CDS
T06113
Name
(RefSeq) regulator of nonsense transcripts 1
Organism
mrt
Malassezia restricta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
DEAD
SLFN-g3_helicase
UvrD-helicase
NPHP3_N
SRP54
NAT10_TcmA_helicase
AAA_22
DUF7169
nSTAND3
PhoH
AAA_16
Mg_chelatase
Flavi_DEAD
Zn_ribbon_IFT122
UvrD_C_2
Ribosomal_S13_N
ATPase
Motif
Other DBs
NCBI-GeneID:
38738375
NCBI-ProteinID:
XP_027483265
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Position
II:1278364..1281237
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AA seq
957 aa
AA seq
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MTQPARTGEHDPVMDDLEKEIDEMYVNEANEYVEDDAEPVAEHACAYCGLDDVDCVMKCT
VCDKWFCNGFGKTTSSHIVTHLVRARHKSVMLHPSSPLGDTVPECYSCGSRNPFLLGFLP
AKGDAVVMLLCRSPCNFAANTKDMGWDATQWSPLIENRTFLSWLVKIPSVKQQKKARPIT
AQQILLLEELWRDNERATLADVENPEHEQTLPETLHHYETAKQYVLIHQKLISAEEDYDK
RLKENLTQRDITVNWETSNGKTLVWIRLPQLESGEIRLAMGDELKLIYTGSLAHKWESPI
TVARFSSVSSTEVACEVPHGNKAPLHCTTNFNLEFIWTGTTYSRMNRALNRFFKSKSCMA
PVIRDVLLGKSVDIPLINTQKTLSLSVPGLPELNHSQLSAIKAVLGSPISLIQGPPGTGK
TVTSATLIYHLVRLRKTRMLVCAPSNVAVDQLAEKLHRTGLRVLRLVSRTREVMESSVSF
LSLHEQASSVEPNSQLGHLIQLKHKNGGLNSSDEAKYRTLLENREYELLNAAEVICTTCS
SSADKRLNAFKFPLVLIDEATQATEPECLIPIVQGCQQLVLVGDHQQLGPVVMNRKVARA
GLNESLFERLVLLGVKPRRLEVQYRMHPSLSEFPSNMFYDGMLQNGVSSHERLRKHVAIP
WPIPTMPMMFYQNLGQEEISPSGTSYLNRTEASSVEKLVTALLKAGVAPEQIGVITPYEG
QRNFVINHMQFHGSMMKDAYRAIEVASVDAFQGREKDYIIVTCVRSNNRLGIGFLSDSRR
LNVALTRARFGLIVIGNARVLCKDPLWYHFLVHFKDRNLLVEGALSNLRPSMIQFGPPPV
PRKSKSRLEQAKTNAAIGTESLAMDPVRAPFRGATGTTQTLREGMWDTLSLDAKTLSQSQ
SDWLNQVRQDKDADLESLDGYRSQASIAGSDEDEVRPVKNVSSAQGTSSAPSITKFL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaccagcaagaactggggagcatgatccggtcatggatgatctggaaaaagaa
atcgatgagatgtatgtaaatgaagcaaatgaatatgtggaagacgacgcagagccagtc
gccgaacatgcatgtgcttattgcggtttggatgatgttgactgcgtaatgaagtgcacg
gtgtgtgataaatggttttgcaacgggtttggcaagacaacatcctcccatattgtcact
catttggtgcgtgctcgtcataagtctgtcatgctgcacccatcttctccgcttggcgac
acagtccctgagtgttactcgtgcggctcgcgcaatccatttttgctgggctttctacct
gcaaaaggagacgccgtggtcatgcttctttgccgatcaccgtgtaattttgctgcgaac
accaaggacatgggctgggatgccacgcagtggtctccgctcatcgaaaatcgtacattc
ctatcatggctagttaagataccttcagtcaagcagcaaaagaaggcgagacctatcaca
gcgcagcaaatccttttgcttgaggagctttggagagataatgaacgtgccacattagct
gacgttgaaaatccggagcacgagcaaacacttccagaaacgttgcatcattatgaaaca
gcgaaacaatatgtcttgatccatcaaaagctaatctctgctgaggaagattatgataag
cgccttaaagagaatcttacgcagcgtgatatcactgtaaactgggaaacgagcaacggg
aagactttggtttggattcgcttgccccaattagaaagcggtgaaattcgcttggcgatg
ggtgatgagttaaaactgatttataccggatcattggcgcacaagtgggagtctcctatc
actgtggctcgcttctcgtcggtatcatccaccgaggtggcatgcgaagtgccgcatgga
aacaaagctcctttgcactgtacaaccaactttaatttggaatttatctggacgggaaca
acgtacagtcgcatgaaccgagccttgaatcggtttttcaagtccaagtcatgcatggca
cctgtaatccgtgatgttttattgggaaagtctgttgatatacctctaatcaatacacaa
aagacgctctctctcagcgtcccggggcttcctgaattgaatcattcgcagctatctgct
attaaggctgttcttggatcgcccatcagtcttattcaaggaccacctggaacaggtaag
actgtcacaagcgctacattaatatatcatcttgtgcgtttgagaaagactaggatgtta
gtttgtgctccatctaatgtggccgtcgaccaacttgcggaaaaattacaccggacagga
cttcgagttctccgacttgtgtcacgtacgcgtgaagtgatggaaagctctgtgagcttt
ttaagtttgcatgagcaagcttcgtcagtcgaaccaaactcacaactgggtcatttgatt
caactcaagcataaaaatggcggattgaactcgtctgacgaagccaagtaccgaacattg
ttagaaaatcgtgaatatgagcttctcaatgccgccgaggtcatctgtacgacatgctca
agctctgccgacaagcgactaaatgcgttcaagttcccgctagttcttatcgatgaagct
acgcaagccacggagcctgagtgcttgattccgatcgttcagggttgccaacagcttgtg
ttggttggtgaccaccagcagcttggacctgttgtgatgaaccggaaagtggcgagagca
gggctcaatgagagtttgtttgaacgactagttctacttggggtcaagccacgtcgtctt
gaagtccagtatcgtatgcatccatctctgtccgaatttcccagtaatatgttttacgat
ggtatgctacaaaatggtgtgtcttcgcatgaacgacttcgaaagcatgtggctatccca
tggcccatccctacgatgcccatgatgttttatcagaatctaggccaagaagaaatttcc
cccagcggtacctcatacttaaatcggacggaagcctctagtgttgaaaaattggtaaca
gcactgctcaaggcgggtgtggcccctgaacagattggtgtcatcacaccatatgaaggt
caacggaactttgtcatcaaccacatgcagttccatggcagtatgatgaaagatgcttat
cgtgctattgaggtggcaagtgtcgatgctttccagggtcgtgagaaggattatatcatt
gttacgtgcgtcagaagcaacaaccggctaggcattggcttcctgagtgactcacggcga
cttaacgtagccctgacgcgagctcgattcggtcttattgtgattgggaacgcacgcgtt
ctttgtaaagacccattgtggtatcacttcctcgtacacttcaaagaccgcaacttgctt
gttgagggtgctctgtccaacttgcgaccttctatgattcagtttggcccaccgcctgta
ccgcgcaaatccaagtcgcgacttgagcaagccaagacaaatgcagccatcggaacggaa
tctctggccatggatccggttcgtgcaccatttcgcggcgctacagggactactcaaacc
ctacgtgagggcatgtgggatacgttatcacttgatgccaagactctttcacagagccag
agtgattggttgaaccaagtccggcaggacaaagacgctgacctggaaagcctggatgga
tatcgaagtcaagcatctattgctggttctgacgaagacgaagtgcgtcctgtaaagaat
gtttcctctgctcagggcactagtagtgcgccttccatcacgaaattcctatag
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