Malassezia restricta: MRET_1755
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Entry
MRET_1755 CDS
T06113
Name
(RefSeq) senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_1755
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MRET_1755
5.6.2.5 RNA 5'-3' helicase
MRET_1755
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
MRET_1755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SEN1_N
AAA_30
AAA_19
UvrD-helicase
AAA_22
AAA_16
SEN1_barrel
DUF1302
nSTAND3
AAA
DUF6026
UvrD_C_2
PilJ
Motif
Other DBs
NCBI-GeneID:
38738521
NCBI-ProteinID:
XP_027484312
LinkDB
All DBs
Position
III:complement(247530..252662)
Genome browser
AA seq
1710 aa
AA seq
DB search
MAWLEARHVHDPGQPLYEALEQYVPEANMAWPLARSMYAALACEQAEPKATSYTLDGVVA
MLKTSRGQDKLAWTIAQSVYDGSPSHVETLAPLALESLSASEAPLEQVLSVLTLLCQSEA
MSPLWDRYRPMRVITDVLEHGACDRMPLPCIFAFLVRFLDAMRSPVSYDETLKLIMQHLL
EYRQHAHHDESVRSSALALGALLLEVRLNKAIEAALAHPTPETCIQGDASLSLVLNLYAV
TLMTGSMRTPRLVRPLGLALVYDVVRTVNACLYISCTSQYIASSRKQHGQDKGFAQLLED
VGDMPLPVVSDHVWKQVSLALGSDESHLVPRVLRAYFLHALSIIAPFYPAPVLETHIPKP
SENPPSKSYDTLCSRISALVTQTQHTMTMVVDALTTALEQNTLAEMPSVCISVLPSLSAS
PSKELAHGAHAILRSLSDASYTRFESMHMLWLDAREPAVYGARHFVSLFLHAAHHLSWSL
SLARASVSMLDDMLHVLCDRNMGVLLPYIPWDAGSGADVLHVWTGISECIAAMFGRIPEW
SRTADRQEMLQWIAHVPMLASYMVQSADLASRSNELQPYTDQVYGALAWPLDCAIGWLRL
NHGELLQQLSDYIRRTVHVFKKQQCVMPGPVVKHAVEFLGQQLAVTNAQQRKTLLSTPQM
ELLLDEFIALSRAPGPPAPKKQKLQQQTLSFAPRPLDAPKKKPIVVDLTRDSPKTAAPKP
KSTGKLAQLRNEFQLTRAVARKPQAPLRQFEPDEPRAPLATSSVTGAVKTLPPVKRPPPP
EDSSSSSESEEEEEGLAALASPRKPKAHEVRRSVKPMVDPALQEAMRKAEDEQRRRRLAK
APALTPMHECILSWDMQAKGGLPPTRLDGMPFSIDAARSPLTDTASYMNRFCTLLTLEAW
AQFQQACGDVRDAVSVPLQYTRQSRVDNFVHLEWSTQTAVPVGTYFNETDIVYLELPSRA
IRLTANVLFSKRASTTGPATINLGVQCVCAKAQHAMPFMHEAGWKVTKLLTLTTLRREFA
ALCSVPDLAMTQDVLHARVAQVPDVSKADEVKAMQTYQLNAPQARAVVAAMRTLGFSLIR
GPPGTGKTKTIRALVASFLSRRAGTTIGAKKASAPQARMLLCAPSNAAIDELVIRIKNGV
EIDGKRILPRLVRLGRDEAVHPNVRDVTLDALVEKAGGNAGPSRAMDELQQVEQAWQRKR
TQLESASASQQARALQAELNELTDRRFELREQVASLRSRNKMGALRPGAEHHMARMSILD
DAEIVCTTLAGAGHEMLYRYTFDTVVIDEAAQTVEPSTLIPLRYECMRCIMVGDPKQLPP
TVLSQEAQRLEYDQSLFVRMFNAAPERVHLLSIQYRMHPDISLFPSTAFYDKQLVDGPRM
TELTAQPWHGTALFGPFRFFDVRTPEEPGRSHSLQNPSEAQVAMQVYEALCACAGSSLQD
RIGFVSMYKAQVELLKSLFIKRYGRSTAHEVEFSSVDGFQGQEKDIIVISCVRSNRDGNM
GFLTDYRRLNVALTRARSNMIVIGNADMLCKDKIWRTMITEARSYGFVVPVDSKTFDNPQ
RPAPKFVASKPKVTTEAPSPPKPLPAPKTDTAKASSTPVSTPKMSKQAAPIKVTKAPTPI
SAPTNPKKPNQMTEGVRAPPRVVPSASLLAPPKRKHKTGKWTQIVERNKASKPETPMPAP
KSDRRPPPSHDGPSWLRSARPHTLQKRNPP
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggcatggctcgaggcacgtcatgtgcacgatcccggccagcccttgtatgaagcgctg
gagcagtatgtgccggaagccaatatggcatggccgttggcgcggtccatgtacgctgcc
ctggcgtgcgagcaggccgagcccaaggcgacaagttataccctagatggcgttgtggcc
atgttgaagacgtcgcgaggacaagacaagctcgcctggacgatcgcacagagtgtgtac
gatgggtcgccttcccatgtcgagacactcgcgccactcgctctcgagtccctgtccgcc
tccgaggcgcctctggaacaagtgctcagtgtgctgaccttactgtgtcagagcgaggcc
atgtcgccgctgtgggacaggtaccggcccatgcgagtgatcacggatgtgcttgagcac
ggtgcctgcgatcgaatgcccctcccatgcatctttgcctttctcgttcgcttcctcgac
gcgatgcgcagtccagtgtcgtatgacgagacactcaagctcatcatgcagcacctctta
gagtatcgacagcatgcacaccacgatgagtctgtacgaagctcagcactagcactcggt
gctttgttgctggaagtccgcctcaacaaagccattgaggctgccttggctcatcctacg
cccgagacatgcatccaaggcgacgcatccttgtccctcgtgctcaacctatacgctgtc
accctcatgactggcagtatgcgtacccctcgactcgtgcgcccactgggcctcgcactg
gtgtacgatgtcgtaaggaccgtcaatgcgtgcctgtatatatcgtgcacgtcgcaatac
atcgcttcgagtcgaaaacagcatggtcaggacaaaggatttgcgcaactactagaagat
gtcggagacatgccccttccggtcgtttcagaccatgtatggaagcaagtatcgctcgcg
ttgggcagcgacgaatcgcatcttgtgcctcgtgtcctgcgtgcgtattttctacacgcc
ctttccatcatcgcacccttttatcctgcgcctgtactagagacgcacatacccaaacca
tcggaaaacccgccctccaagtcgtacgataccctttgttcacgtatatctgcccttgtg
actcagacgcagcacaccatgactatggtcgtcgatgccctcactacagcgcttgaacag
aacacgctggccgaaatgccatccgtatgcatatccgtcttaccaagtctaagtgcctcg
ccatccaaggagctggcgcacggtgctcatgccattctacggtccctaagcgatgcatcc
tacacccgctttgaatccatgcacatgctctggctcgacgctcgtgaaccggccgtgtac
ggagcgcgccattttgtatcacttttcctacatgctgcacaccacctgtcttggtctcta
tcgctcgcacgagcatccgtgtccatgctagatgatatgcttcacgttctttgtgaccgc
aatatgggcgtattgctgccctacattccctgggacgccggcagcggtgcggatgtgctt
catgtatggactggcatatctgagtgcatcgcagccatgtttgggcgcatcccagagtgg
tcccgcacagctgatcggcaggagatgctccaatggattgcacacgtgccgatgctggca
tcgtacatggtccaaagtgctgacttggcaagtcgctcgaacgagctgcaaccgtataca
gatcaagtgtatggcgccctggcctggccacttgactgtgcgattggatggctccgacta
aatcacggagagctgctgcagcagttgtctgactacattcgaaggaccgtgcatgtgttt
aagaagcagcagtgtgtaatgccagggcccgttgtcaagcacgccgtggagtttttaggg
cagcagctcgctgttaccaacgcacaacagcgcaagacgcttttgtctacgccacaaatg
gagctgctgctggacgaattcatcgctctctcgcgcgcgccaggacctcccgctcccaaa
aagcaaaagctccagcagcagactttgtcgtttgcaccgcgtccattggatgcaccgaag
aagaagcctattgtggtggacttgacgcgcgactcacccaagaccgcggcaccgaagccc
aaatcgacaggtaaattggcgcagctgcgcaacgagtttcagcttactcgggctgtcgct
cggaaaccccaggcgcccctgcgccagtttgagccagacgagccgcgtgcacctttggcg
acgagcagcgtgacgggcgcagtcaagacgcttccaccagtgaaacgtcctccaccgcct
gaagacagctcttcgagcagtgagagcgaagaagaggaagaaggtttggctgctcttgca
tcaccccgtaagcccaaagctcacgaagttcgccgcagtgtaaaaccaatggttgatcct
gctttgcaagaagccatgcgcaaggcggaagacgagcagcgacggcgtcgccttgccaag
gctccggcactcacacctatgcatgaatgtattttgtcttgggacatgcaggccaaaggc
ggtctgcctccaactcgactggatggcatgcccttttcgatcgatgctgcgcgatcgcct
ttgacagataccgcttcatacatgaaccgattctgtacattactcacgcttgaggcgtgg
gcacagtttcaacaagcatgtggtgatgtgagagatgctgtgtctgtgccgttacaatat
acccgccagagccgcgtagacaacttcgtgcacttggaatggtccacacaaacggctgtg
cctgtcggcacgtacttcaatgagaccgatatcgtgtacttggagttgccttcccgtgcg
attcgactgaccgcaaatgtcttattcagtaaacgtgcctcgaccacgggccctgccacc
atcaacttgggcgtgcagtgtgtatgtgccaaggctcagcatgctatgccattcatgcat
gaagctggatggaaagtgaccaagctcctgacccttacaacacttcgtcgagaattcgcg
gcattgtgcagtgtgcccgacttggcgatgacccaggatgtattgcatgcaagagttgcc
caagtacctgacgtatccaaagcagatgaggtcaaggctatgcagacgtaccaactcaat
gcgcctcaggctcgagctgtcgttgcggccatgcgtaccttgggcttttctctaattagg
ggcccacccggcacaggtaagactaagacgattcgtgcgctggtcgcttctttcctctct
cgccgagcgggtaccaccattggagccaaaaaagcctcggcaccacaggcccgcatgctg
ttgtgtgcgcccagtaatgcggctatcgatgaattagtgattcgcataaagaatggcgtc
gaaatcgacggcaagcgcattttgcctcgtctcgtgcgcttgggtcgtgacgaggctgtc
catccaaatgtgcgcgacgtgacactcgacgcacttgtcgaaaaagccggaggaaatgcc
ggtccatcccgggccatggacgagctgcaacaagtcgagcaagcgtggcaacgaaagcgt
acacagctcgagtcagccagtgcatcgcagcaagcacgcgcgctccaggcggagctcaat
gagcttaccgatcgccgctttgagctacgtgagcaagtcgcctcacttcggagtcggaac
aaaatgggcgcccttcgtccaggtgcagagcatcatatggctcgtatgagcatcttggat
gatgccgagattgtatgcacgactctggccggtgcggggcatgaaatgttgtatcggtac
acgtttgacacggtggtgattgatgaagcagcccagactgtggagccgagtacgttaatt
ccactgcgatatgaatgcatgcgttgcattatggtgggtgatcctaagcaactgcctccg
actgtgctcagtcaagaggcccaacgcctcgagtacgatcagtcgttgtttgtgcgcatg
ttcaatgcggcgccagagcgcgtacatttactgtctattcagtatcgtatgcatcctgac
atcagccttttcccctccacggccttttatgacaagcagctggtagatgggccgcgtatg
actgagttgacggctcagccgtggcacggcaccgctctgtttggtccatttcgcttcttt
gacgttcgcacacccgaagagcctggtcgaagtcactcgttgcagaacccttccgaagct
caagtggcgatgcaagtatatgaggccctgtgtgcctgtgctggatcaagtctgcaggac
cgtattggctttgtgagcatgtacaaagctcaggtggagctgctcaagtcgctttttatc
aagcgatacggccgttctacggcgcacgaggtggaattcagcagtgtggatggttttcaa
ggtcaagaaaaagacattatcgtgattagctgtgttcgaagcaacagggatggcaatatg
ggcttcttgaccgactatcgacgtctaaacgtggcattgacgcgcgctcgcagtaacatg
attgtcattggtaacgcggacatgctgtgtaaagacaagatatggcgaacaatgatcacg
gaagctcgctcctatggcttcgttgtgcccgtggatagcaagacctttgacaatccgcag
cgcccagcgcccaagtttgtggcttccaagccgaaagtgactaccgaagcaccatcaccg
cccaagcctttgccagctccgaaaacagatacagccaaggcttcgtcgacgcctgtctcg
acccctaaaatgtctaaacaggctgcgcctatcaaggtcaccaaagcacccactcccatc
tcggcacctaccaatccaaaaaaaccgaatcaaatgacagaaggcgtccgggcaccgcct
cgtgtggttccatcagcctccttgctggcgcctccgaagcgcaagcacaaaactggcaag
tggacgcagatcgttgaacgcaacaaggcctccaaaccagaaacgcccatgcctgcacca
aaatctgatcgacggcccccacctagccatgacggaccaagctggcttcggtcagcgcgt
ccccataccctgcaaaagcgaaatcctccgtaa
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integrated database retrieval system
