Malassezia restricta: MRET_1800
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Entry
MRET_1800 CDS
T06113
Name
(RefSeq) U4/U6 snRNA-associated-splicing factor PRP24
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_1800
03036 Chromosome and associated proteins [BR:
mrt03036
]
MRET_1800
Spliceosome [BR:
mrt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
MRET_1800
Chromosome and associated proteins [BR:
mrt03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
MRET_1800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
38738566
NCBI-ProteinID:
XP_027484629
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Position
III:324154..327450
Genome browser
AA seq
1098 aa
AA seq
DB search
MGEAMETESITPQPTLDPWEYDAWIRSIERKMLGCENASERPAYIPDLLRAMQESLHVMA
LRPRDWHIYLSVHMMQGELDVHQICALHQRSVRDTFDMSLFVRCASFWLCAWMCHTRSFI
SLELSGTPTDADGAPYNVTQLVEAWTGLSSPNVLPCGMYDPAHFGMTLDLDEHQVRDSLR
ELYSQCAWHLSESCLIWDLYMAFEQALLESDPSDARVQMVKQAFIARLQVPHQGVETTFQ
RLSSFVSTYLPASEYEPVMSSANRAYAETMDLWRLRESFEERIAMSNDLHAHWYPYLAWQ
THRIKQMRTAKDKSHLSTEEELGFTLYRRAIHRFGSYPTARNAEESASHANVPPTPDIEK
RWKQAQGRKSHKLLETERERARVEVRPLVAVSEGLWLDFLALLSTPTLNLDAFLVLCSQA
VSVLPLSGRLWAVYLRAITRCQRPKSHMLALYEKAAHSRGVALLGGASLLSLLQARIDCE
RAYAAMELAHAQKKSPDQVLVVTEMDHFMHVYELFLHSISAMQRLPASEQDASVALERCA
VDWIERAARALAQTAGLEASAGLYPLADDVWTHALEQHPMHATAYLEAAQYFQRRDDDKR
ARQTYKAAMAKQGLDNKASIVAAWVAFEHARGSPADIEQAEAKAKVEQDRLWRQWYRYQA
QEPAAAPESAPESEVPKRKSTHEEHEEEAAPPKRQDAHSVQPARDREFSSVLVSGMPPDV
SEGDVRAFFRDCGIIFDMIGPRSLDDATSAALIEFTDRDSAGAARTRDKKLMGHSEISVV
LSYQCTLYVTNFPPDASDALVRERFSKYGPIFDVRWPSRRFIQSRRFCYIQFATADAARA
ALAEHGALWHADHALQVFLSNPQHKKQRSDANANEKELYVVGLPRSATVEQVRQFFLPHT
HVEDVRMPLRPDGKARGIAFIQCRTPLDARRAMQATNSTKFHGRLIAVTMADAGRSSKNS
SAPEADRRARTIHVAGLPPDAQEALIQQAIEMAIGPETVRRVFWTPGRPPNSQGLCDSMV
EMVDEEAAGRAVLSADVTYGTMPLALSMYQQQVTSSTSAATSMRDRRRGALGFARVHSSE
STDTTPKGQDAFRQMLHP
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggctatggagaccgagtcgatcacaccgcagcctacgctagatccatgggag
tacgatgcttggatccgatctattgagcggaaaatgctgggctgcgagaatgcgtcggaa
cgccctgcatatattcccgacttgcttcgcgcaatgcaagaatcgctccatgtgatggcg
cttcgaccacgcgactggcatatttatcttagtgtgcatatgatgcagggcgaacttgat
gtgcatcaaatatgtgctttacatcagcgcagtgttcgtgatacctttgacatgagtctg
tttgtccgctgcgccagtttctggctctgtgcatggatgtgccacactcgttcattcata
tccttggagctgagtggtacgcccacagatgcagatggtgcaccgtacaatgtgactcaa
ctcgtggaagcatggacgggtctgtcatctcccaatgtcttgccgtgcggcatgtacgat
cctgctcactttggcatgacattggatctggacgagcaccaagtacgagactctcttcgt
gagttatacagccagtgcgcatggcatttgagcgagagctgcttgatatgggatctgtat
atggcgtttgaacaggcccttctcgaatctgatcccagtgacgcacgtgtccagatggtg
aaacaggcctttattgcgagacttcaagtcccgcatcagggtgtagagaccacatttcag
cgtttatcgagctttgtatccacatacctacctgcttctgagtatgagccagtcatgtca
agcgccaacagagcctatgctgagaccatggatctttggcgccttcgcgagtcatttgaa
gaacgaatcgcaatgtcaaatgatttacatgcacactggtatccttacttagcgtggcaa
acgcaccgtatcaagcagatgcgcacggcgaaggacaagtcgcatctttcgacggaagaa
gagctcggcttcacgctgtaccgtcgggccatccacaggtttggttcttaccccacagct
cgcaatgccgaggaatcagcttcccatgcaaatgtaccgcccacaccggatatcgaaaag
cgttggaaacaagcgcaagggcgaaaaagccacaaattgttggaaacagaacgagaacgg
gcccgcgtagaagtacggcctttagtcgctgtctcagaaggcttgtggctcgattttctc
gctttactttccacaccaacactgaatctcgacgcctttctcgtcctatgctcccaagcc
gtctccgtcttaccgcttagtggtcgtttgtgggccgtatacctgcgtgccataacgcgg
tgccaacgacccaagtcacacatgctggcactgtacgagaaggcggctcattcccgaggt
gtggccttactgggcggcgcatcactgctttcactacttcaagcacgcatagactgtgag
cgagcctatgcagcaatggaattggctcacgcacaaaaaaagtcgcctgatcaggtgctg
gtggtcactgagatggatcattttatgcacgtttacgagctgttcctccacagtatttcc
gccatgcagaggcttccagcctctgagcaggacgcttccgtcgcactggaacgatgtgcg
gtggactggatcgagcgcgcagcgcgtgctctcgcccaaacggctggcctggaggcgtca
gctggtttgtacccactcgccgacgatgtttggacacatgcacttgagcagcacccaatg
catgctactgcttacctggaagcagcgcaatactttcaacgacgtgatgatgacaagcgc
gcacgtcagacgtacaaggctgccatggccaaacaaggcctcgataacaaggccagcatc
gttgctgcgtgggtcgcttttgagcatgcgcgtggttcgcctgccgatatcgagcaggcc
gaggccaaagccaaggtggagcaggaccgcctatggcgccagtggtacaggtaccaggct
caagagcctgccgctgctcccgagtcggcacctgaatcggaggtccccaagcgcaagtcg
acgcacgaggagcatgaggaagaggccgcccctccgaagcgccaggacgcacactctgta
caaccggcaagagatcgcgagttttcatctgtcctagtgtcagggatgccgccggatgtc
tcagaaggagacgtgcgagcatttttccgggactgtgggatcatatttgacatgatcggg
ccgcgcagcctggatgacgcgacgagtgctgccctgattgagtttactgatcgcgatagc
gcaggagctgctcgtactcgcgacaagaagctgatgggtcactcggaaatcagtgttgtt
ctgtcgtatcagtgcacattgtacgtgaccaactttcctccggatgcatcggacgcctta
gtgcgcgagcgcttcagcaagtatggaccaatttttgatgtgcgctggccaagtcgtcgc
ttcatccagtctcgaaggttttgctatatccaatttgccaccgcagatgccgcgcgtgcg
gcactcgctgagcatggcgccctgtggcatgcagaccacgccctgcaagtgtttctgtcg
aatcctcaacacaagaagcagcgctcggatgcgaatgcgaacgagaaagagctgtacgtg
gtgggtctgcctcgctctgccacagtggagcaggtccggcagttctttctgcctcataca
catgtcgaagacgtgcgcatgccattgcgccccgacggtaaagctcgcggtattgccttc
atccaatgtcgtacacccctagatgctcgtcgagcgatgcaagctacgaacagcaccaag
ttccatggaagactcattgccgtgactatggccgacgcaggtcggtcatcgaagaattct
tctgcacccgaggcagatcggcgcgcaagaaccatccatgtggcaggcttacctcccgat
gctcaggaagctttgatccagcaggccattgagatggcaattggtcctgagaccgtgcga
cgtgtgttctggacacctggtcgtcctccgaatagccagggcctgtgcgacagcatggtc
gaaatggtggatgaagaggcagcaggccgcgctgtgttatcagccgatgtcacgtatggg
accatgccgctggcattgagtatgtaccagcagcaagtgacatcttcaacatcagcagcg
acctcgatgcgcgatcgacgacgcggcgcacttggctttgcccgggtacattcatcagag
tccactgataccacgcctaaggggcaggatgcattccgccaaatgcttcatccatag
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