Malassezia restricta: MRET_1882
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Entry
MRET_1882 CDS
T06113
Name
(RefSeq) protein SSD1
KO
K18748
protein SSD1
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_1882
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
MRET_1882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
Rrp44_CSD1
FlxA
OB_RNB
UPF0449
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
38738648
NCBI-ProteinID:
XP_027484277
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Position
III:complement(454620..458177)
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AA seq
1185 aa
AA seq
DB search
MASSSDGAASAPNVQETGADGSYDRMGRIERLPSAQEQLLRTQLQQLGLEADDDAPLLNK
DRNADMVAPVHPWPSSNTWGHDALDSFGAALAASARTWPSSAPSPPHPTPFSFHHQSNDL
GQNLRFPSSRPNYMSASEEVEQQRQAIQHQIEQLQRQHEQLQFHQQMLQPGMSLSSDLPQ
TRHPVRNMSMENRYHPTPMSGTWAPIGNESISLRSNFTFPPRSQSESPMPPQQSHAMIPP
SAYNDRTPSSLHTGYTRQASQQLTSDLSPKFLMAGGGLINLNTLDLSATWNEYDDKHSNS
PPQERAAQRHARSSSASSAALHSPAMDTLLTGLPQAQAQLAALRRSRHHIGPNMHNRSMS
HGRSASIGSNASGAPRRALFGSYLPQNSLPLLLLAGKLVVGVLRINKRNRSDAWVTTEVF
GQDIFISGSKDRNRALEGDIVAVELLNAKEVWQTKRDKADKKKRKEEFSQGVPASGISTH
PAGRRTDKARDDIEVEGAQLKLVEDEEESETGPPPLAGHVVAIVERMPGQIFPGTLALLR
PSSAATKEKQQAERGECDSPPIGAAGLSRPKIIWFRPSDKRVPLIAIPSDQAPEDFWDEK
KQESFAHCLFFACIKRWPITSLHPFGSLVDRVGPIGSLDAESQALLRSYCHDIVTPFSDM
ALRNVPTIESWSIPHNEYEARRSFSAFTLNGRGPRQMAFSVDLHGSNSFTIGVHVADITY
FLQANSALDREARRRGASVHLVQESFEMLPPDLLRIAALHVNSDALAKSVVFTFQSDRVV
DIWIGRSIVHVKHMTSHAELDRVLLGEATSFPVAPDALCAVLDKAQQLRLERLARGGLSL
PRTWLEFDLDAKQHPTDVHCCTDAESLSHLLVDEFCVRANTAVAHRLAAALEDNALLERQ
DVPTERAWNLLARGLQALGLPAESLSSMTLASALNILPASSRSVANALTQRALSDSKLYT
PALVDATKFMHYAIGEPVYTQFVSPLQRYSDVCVHRQLDMVLDGTLHAEHQGTDTLSKLA
HQCTVKNRAVRAAEMQSAHLYLCQWLKDTSELRPGELEARRALVMSVNASSMDILVPSFT
LEKRVHLDCLPVENIHWDPVTYSVTLTWLSGVDSMAWLGEAIDDAQCTKLSSTRKETRDT
NAPSPKAISSRQQRITSMTELDVYVLSDMEKSPPIIKVVVLNPCA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtcatctgacggtgcagcttcagccccaaatgtgcaggaaacaggtgctgat
ggctcatatgatagaatgggtcgtatagagcgcttaccatcggcgcaagaacaacttctg
cggacgcaactgcaacagcttggactagaagctgacgacgatgcacctcttctgaacaaa
gataggaatgctgacatggtagcgcctgtccatccttggccttcgagcaatacatgggga
catgatgcactggactcgtttggtgcggcacttgcagcttcagcccgtacttggccgagt
tctgccccgtcaccgccacacccaacacccttctctttccatcatcaaagcaatgacctg
ggtcagaacctccgttttccctcatctcgtccaaactatatgtctgcatcagaggaggtt
gagcagcagcgccaggcgatacagcatcagattgaacaattgcaacggcaacatgaacag
cttcaattccatcaacaaatgcttcagccaggtatgtctttgtcgtcagatttgccacaa
acccgtcatcccgtaagaaacatgtccatggagaacagatatcaccctacccctatgagt
ggcacatgggcccctattggaaatgagtcaatatcccttcgttccaacttcacgttccct
cctcgctcgcagtccgaatcacctatgccgccacagcagtcccatgccatgatacctcca
tctgcctacaatgaccgtacaccatcctctttgcatactgggtatactcgacaggcatcg
cagcagctcacatctgacttgtccccaaaatttttaatggctggtggcggtctcattaat
ctgaacactttggatcttagtgcaacatggaacgaatatgatgataaacattcgaactct
ccgcctcaagaacgtgcagcacagcgtcacgcacgctcaagcagtgcttcgagtgccgct
ctccactcaccagcgatggacactttgcttactggccttccacaggcccaggcacagcta
gccgcgcttcgccggagccgacaccacattggacctaacatgcataataggtcaatgtca
catggacgctcagccagcataggctcgaatgcatcaggagctcctcgccgtgcattgttt
ggcagttaccttccccagaacagcctccctttacttctacttgcgggtaagcttgtcgtt
ggtgttctgcgtataaacaaacgcaaccgcagtgatgcatgggtcacgactgaagtattt
ggtcaagacatttttattagtggttcaaaagaccggaatcgtgcactggaaggtgacatt
gttgctgtcgaactgctaaacgcgaaagaggtctggcagaccaagcgcgacaaggccgac
aagaagaagcgcaaagaagaatttagccaaggagtgcctgccagcggtatttcgacgcat
cctgctggacgtcgaacagacaaagcccgcgatgatattgaagtggaaggtgcccagctc
aagctggtagaagacgaagaggaaagcgaaactggtccccctcctttggctggccatgtg
gtggccattgttgaacgcatgcctggtcaaattttcccaggtacactagcacttttgcgc
ccaagcagtgctgcgacaaaagaaaaacaacaagctgagcgtggagaatgtgatagtcct
cccatcggtgcggctggtttatcacgtcccaaaattatttggttccgtccgtccgacaag
cgcgtgccactaattgctattccatccgaccaagcgcctgaagacttttgggatgaaaag
aagcaagaaagtttcgctcattgcttgttttttgcctgcattaagcgttggccgattacg
tcgttgcatccgttcggctcacttgtcgaccgtgtcggccccattgggtcattagatgca
gaatcacaagcactgctgcgttcttactgtcatgatattgttacaccattctctgatatg
gcactccggaatgtgccaacaattgaatcatggagcattcctcataatgaatatgaagca
cgccgctctttttctgcttttactctgaacggtcgtgggccacgtcagatggcattctcg
gtggatttgcacggctctaactcctttactatcggtgtacatgtggcagacatcacctac
tttttacaagccaacagtgctttggaccgcgaagcgcgtcgccgtggtgcgtccgtgcac
cttgtacaggagtctttcgagatgctgccacctgatcttttaagaatcgcggcactccat
gtgaattctgacgcactggctaagtctgtggtcttcacatttcaatcggatcgtgtcgtc
gacatttggattggccgttcgattgtgcatgtgaagcatatgacatctcatgcagagctt
gaccgcgtattactgggagaagccacgtcgttcccggtggcgcctgatgcgctttgtgct
gttttggacaaagctcagcaattgcggcttgagcgcttggcacgcggtggtctgagtctt
ccgcgcacatggctcgagtttgacttggatgccaagcagcaccctacggatgtccattgc
tgcacagatgcagaatcgctttcacatttgttggtggatgagttttgtgttcgagccaac
acggccgtggcgcaccgcttagccgccgcgctcgaggataatgcgctgctggagcgacaa
gatgttccgaccgaaagagcttggaatttacttgcaagaggtctccaagcattgggacta
ccagccgagtccctgtcatcgatgacgttggcatccgcactgaacattttgcctgcctct
tctcggtcagtggctaatgctcttactcagagagccttgtctgactcaaaactctatacg
ccggcattggtcgatgcgaccaagtttatgcactacgccatcggtgagcctgtgtataca
cagttcgtgtctccactccagcggtattcagatgtatgtgtccaccgccagctcgatatg
gtgctggatggcacgttacacgcagagcatcaaggcaccgacacactttccaaactcgcg
catcaatgtaccgtgaagaatcgtgctgttcgtgctgctgagatgcagagtgctcacttg
tacttgtgtcaatggctcaaagacacgagtgagctgagaccaggtgaattggaagcacga
cgcgctttggtcatgtcagtcaatgcttcatctatggatatacttgtcccgtcattcact
ctcgaaaaacgtgtgcatcttgattgtctccccgtggaaaatatccattgggaccctgtg
acctactctgtcacgttgacatggctgagcggagtcgattctatggcttggcttggtgag
gcaatcgatgatgcgcaatgtaccaagttgtccagcacccgaaaagagacacgagacacg
aatgctccttctcccaaagctatctcatcacggcaacaacgcattacgtccatgacagag
ctggatgtgtacgttctgtccgacatggaaaagagtccaccgatcatcaaggtggtagta
ttgaacccatgtgcttaa
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