Malassezia restricta: MRET_1961
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Entry
MRET_1961 CDS
T06113
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_1961
Spliceosome [BR:
mrt03041
]
Common components
Common spliceosomal components
General mRNP proteins
MRET_1961
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
38738727
NCBI-ProteinID:
XP_027484411
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All DBs
Position
III:588090..589376
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AA seq
428 aa
AA seq
DB search
MYADKEEALRRTLASGPMTPEEREKQLQEELRRRAADSRRDTHHQSHDMRRASRRRGEEV
EDRYMSQAPRDSGDGRWREEASYRHQRSGGRRPHHGDDARMRRRSRSPVGRGSRAVPFGA
EYETKSVFCSELDSRVGQRDLGEFFEDNLGPHSVVDVRLEVEVKTGASRGIGYVELSDAA
LVPRALELSGKRMFGWPILVQNADAARKNPVVGMYEPPRASVSTTSVPPPAAVPSNTDAR
LYVGNLHFDIAAPHVRAVFEPFGPLDDVEVYYHPVTGKSKGFAFVQFQEVQDAQQAMEQL
NGMDLAGRAMRVGPVNARGSDRRDVGPSHEAAPTAVLLRHMFDPREETEPQWHVDLSEDV
RLECTRHGHVDSVFVDKDSHDGEVYVCFHRPEEAQSACASLQGRFFGGKLVEARLIQASL
AQAKYAST
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgataaggaagaagcattgcgccgaacgctagcgtcaggacctatgacgcca
gaagagcgtgagaaacagctgcaagaagagctgcgtcgaagagccgctgattcgcggcgc
gatacgcatcatcaatcgcacgacatgcgacgagcgtcgcgaaggcgtggagaggaagtt
gaggaccggtacatgtcacaagctccgcgtgatagtggcgatggacgttggcgtgaggaa
gcatcatatcggcatcagagatcaggtggacggagaccgcaccatggcgacgacgcacgt
atgcgacgccgaagtcgaagtccggttggccgcggatcgcgggcggtgccgtttggtgct
gaatacgagaccaagtcggtgttttgcagtgagctggactcgcgtgtaggacagcgtgac
ttgggtgagttttttgaggacaacttgggtccccattcggttgtggatgtgcgacttgaa
gtcgaggtaaaaacgggtgcatcacgaggaatcggctatgtcgaactcagcgatgcagca
ctcgtgcctcgagctttagagctgagcgggaagcggatgtttggatggccgattcttgtg
cagaatgcagatgcggcgcgcaaaaacccagttgtcggcatgtacgagccaccacgggcg
tcggtatcgacgacaagtgtgccgccgcccgccgctgtgccatcgaatacggatgcgcgg
ctatatgttggcaatctacactttgatattgcggcaccgcatgtgcgtgcggtgttcgag
ccgtttgggccattggacgatgtcgaggtgtattaccatcctgtgacgggtaagagcaag
ggcttcgcttttgtgcagtttcaagaggtacaagatgcgcagcaggctatggagcagctt
aatggcatggaccttgcaggccgtgcgatgcgcgtcggaccggtgaatgcgcgtggatct
gacaggcgcgacgtaggtccatcgcatgaggcggcaccaacggccgttctgttgcggcat
atgtttgatccgcgagaagagacggagccgcaatggcacgtggatttatctgaggacgtg
cgactcgaatgcactcggcatggacatgtcgattccgtctttgtcgataaggacagtcac
gatggcgaggtgtacgtatgttttcatcgtcccgaagaggcgcagagtgcatgcgcaagt
cttcaaggccgctttttcggtggcaagttggtagaggcgaggctgatccaagcttcgctc
gctcaggccaaatatgcctccacgtga
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