Malassezia restricta: MRET_2101
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Entry
MRET_2101 CDS
T06113
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2101
09122 Translation
03013 Nucleocytoplasmic transport
MRET_2101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_2101
03041 Spliceosome [BR:
mrt03041
]
MRET_2101
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MRET_2101
Spliceosome [BR:
mrt03041
]
Complex C
Other components
EJC/TREX
MRET_2101
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MRET_2101
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
38738867
NCBI-ProteinID:
XP_027484055
LinkDB
All DBs
Position
III:complement(766630..768777)
Genome browser
AA seq
715 aa
AA seq
DB search
MSGVKEAVARVSDALDACIPQMQDSLQRRKEALRVPRLDVHTSQAELESCMQHDLPQIYE
RAHKACVDARSDADKPGLWEEVLTSCISSKMHTYIRAYASVEDAVDRLDMALYLARHHMA
DASLPLSSLEEVLDESTVSACDHLFAYAELRAPVLTQDMVPTSGKGLVLLRIGNKLLRRL
SKTHRGHAVLAGRVLLLLSSTFAVNERSGVNLKGEFGPNLLEPPPVATGDAPSSTAPDAL
MMHPNFYVAFWAMQAYFMNPACLWQQDEVPPGAQALEALTLLSSDSFTPMKTFQVGIQCV
LDVFRWLHKRTDASAKAHTGLFHETEMASAYPQYLTHQDLFVYELQNMAFQRQFLMQCLI
TFQYLLGQTSASHEHCQAWKNQLLVPPHTLCDADEQWVRKTWRQVQTLLRDSAKDGKVFL
DAALLLLRRESSWIRWKGDGAPSFYHDMFPADTLQACSDKIATVFSVQEPWYPHAVGTAE
LSRLWANGLHIPAPSRVEVQDEEGQTKSVTTDGWEDLEFPPNRPSVQALCRMMEHSSDAD
KKQGLAWRALRCVGREHLHLLACMTSLDDIPSLLQVMDDEKKGVPYESEHMGQEPMADED
IPDEDMPPAHEETHQEPCPEEGPQEETFDEAPPEAPADGHEDSTQDTLEHADHDQADDDA
SHQETAPKDVEDAPSSVLSSSSSSPLSSSGDADHGDADATFMTAPAPDVPSSMDI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagtgaaggaagcggtggcgcgcgtgtctgatgcgctggacgcgtgtatacca
cagatgcaagactcgctgcagcggcggaaggaggcgctgcgcgtaccgcgactagatgtg
catacatctcaagccgagctggagtcgtgcatgcagcatgacttgccgcagatatatgaa
cgcgcccacaaagcgtgtgtggatgcgagatctgatgcagacaagcctgggctgtgggag
gaagtgctcacatcatgtatatcgagcaagatgcacacctatattcgggcgtatgctagc
gtcgaagatgcggtagatcgcctggatatggccttgtacttggcccggcaccacatggct
gatgcgagcttacccctttcatctctggaagaggtgctagatgaatcgaccgtgtcggcc
tgcgatcatctctttgcgtacgcagagctacgtgcccccgttttgacgcaggatatggtg
cccacctcaggtaagggcctcgtccttttgcgcattggcaacaagctcttgcgccgcttg
tccaagacacatcgagggcacgccgtactagctggtcgtgttttgctgttgctctcgtcg
acattcgccgtcaatgagcgcagcggcgtaaatctcaagggcgagtttggtccgaatctg
ctcgaaccgcctcctgtcgccacaggcgacgccccatcgagcaccgcacctgatgccctc
atgatgcatccaaatttctacgtggccttctgggctatgcaagcctattttatgaatccc
gcctgtctgtggcagcaggacgaggtaccgccaggcgcacaagcactcgaagcactgacg
ctgctttcctcagactcgtttacacccatgaaaacctttcaagtgggcattcaatgcgtg
ctggacgtgttccggtggctccacaaaaggaccgatgcctccgccaaagctcacaccggc
ctgttccacgagacagagatggcgtcagcgtatccccaatacctaactcaccaagatcta
ttcgtgtatgaactgcaaaacatggccttccagcggcagttcctgatgcagtgtctaatc
acgttccagtacctgctaggacaaacaagtgccagtcacgaacactgccaggcgtggaag
aaccaacttcttgtgccaccccataccctgtgtgatgcggacgagcaatgggtacgcaaa
acatggcgacaagtccaaacactgctgcgcgattctgccaaagacggcaaagtgtttctc
gatgccgctctcctgctgcttcggcgagaaagcagctggattcgatggaaaggagatggc
gcgccatcgttttatcacgatatgttccctgctgacacgctgcaggcatgttctgacaag
atcgcgactgtgttctctgtacaagagccttggtatcctcatgccgtcggtacggcagaa
ttgtcgcggctctgggcgaatggccttcacattcccgcaccctcccgtgtcgaggtgcag
gatgaggaaggacagaccaaaagcgtcaccacggatggctgggaagacctcgaattccca
ccgaatcgtccgtcggtccaagccttgtgccgaatgatggaacacagctcagacgcagac
aagaaacaaggcctcgcatggcgggcgttacgatgcgttggtcgtgaacatctgcacttg
ttagcctgcatgacatcgctggatgatatcccaagtctcttacaggtgatggacgacgag
aagaaaggcgtgccatacgaatcagagcatatgggtcaagaacccatggcggacgaggac
atacccgatgaagacatgcctcctgctcacgaagagacgcaccaagaaccttgcccagaa
gaaggtccccaagaagagacgttcgacgaagcccctccagaagccccagcagacggccat
gaggactcgacccaagacacgttggaacatgccgaccatgaccaggccgacgacgacgcg
tcacatcaagaaactgcgcccaaagacgtcgaagatgccccgtcgtctgtgctttcctca
tcgtcctcctcacccctgtcttcctccggcgacgccgatcatggcgatgctgatgccacc
ttcatgacggcgcctgcgcctgacgtcccatccagcatggacatttaa
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