Malassezia restricta: MRET_2102
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Entry
MRET_2102 CDS
T06113
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
mrt03015
mRNA surveillance pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2102
09122 Translation
03013 Nucleocytoplasmic transport
MRET_2102
03015 mRNA surveillance pathway
MRET_2102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_2102
03041 Spliceosome [BR:
mrt03041
]
MRET_2102
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MRET_2102
Spliceosome [BR:
mrt03041
]
Complex C
Other components
EJC/TREX
MRET_2102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
38738868
NCBI-ProteinID:
XP_027484052
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All DBs
Position
III:join(768914..768938,768967..769119,769146..769282,769315..769506)
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AA seq
168 aa
AA seq
DB search
MDDERMDLDPSIRRRGRGFDMNGASEAEGVKSQGFEQLDVDMDQADDDAPVAGHGHPAQS
MEGWVVVVSNIHEEALEDDVLDVFSEYGKVRDLHLNLDRRTGYVKGYALLQYKTKAEAQR
AIDACQQGLTLLEQALDADFAFVQPPAKTDARVPRRTTRDRSLSPMRQ
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcgtatggacttggatccaagcattcggcgacgaggtcgtgggtttgat
atgaatggcgcgagtgaggcagagggtgtcaagtcgcaggggtttgaacagctggatgtg
gacatggaccaggccgatgacgacgcacctgtagcagggcatggccatccggcacagtct
atggaaggctgggtagtggttgtgtcgaacatacatgaagaggccctagaagacgacgtg
ctggatgtattttcagagtacggcaaagtgcgtgacctgcacctcaacttggaccgacgc
accggctacgtcaagggatatgcacttcttcagtacaagaccaaagctgaggcacagcgt
gccattgatgcttgccaacaggggctgacgctgctggagcaggctctcgacgcagacttt
gcctttgtgcagccaccagccaagaccgacgcaagagtccctcggcgcacgacgcgtgat
cgcagcttatcccccatgcggcagtag
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