Malassezia restricta: MRET_2108
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Entry
MRET_2108 CDS
T06113
Name
(RefSeq) SNF2 chromatin remodeling protein
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_2108
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
MRET_2108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
ResIII
Vac14_Fab1_bd
HDA2-3
TOR1L1_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
38738874
NCBI-ProteinID:
XP_027484046
LinkDB
All DBs
Position
III:775643..780961
Genome browser
AA seq
1772 aa
AA seq
DB search
MSGSMPATRLDRLVSLLDIGSSSLIRTTAATQLGQIAALRVRGASTAHEGASSSEPAVYR
GTDGEWNEVLTLLARVVPLLLSKNWDTRMAAAQAIYHITQAAGVWDPDTGTERHVSAPIK
AEETPSLGEADRLQFASFSLPHVLQTGTKLLASVGKEYDVPELMSRERLQHAKKDVLGKL
GLGFGADDMDMGIDMDAELAGSKPAPKPAPAPEPEPGADRALSARERNQLKRKRKLEAKA
QTRAPVAHVEPEKRAKLDSTAQASDKAAAVFSLQTQRGEWPFRALAELLSVELVSPTWEA
RHGAALGLRELFRTQGYGGGRVMHASKQDNDERHAVWCENLAVRLLCVFALDRLGDFVFD
HVVAPVRETASQTLAQLLPHMTNELVRSTHHVLLEMVRQDSVREAQLVGREGQRPYIWEV
RHAGLLGIKYEVMMRVDVLGVEDDMLSDVLDVAQLGLRDNDDDVRAVAAAMLLPITSNIV
SHQLARVSDLLDQLFVCVSDKRDDLSSSAASVMDLLASLMSHAEVLGIIDVASLAQRVTM
LFRFFRHTITNVRLSMLNAMHALLQCSSLPHDWVTDDLIRLLLQNMLVEERAPIREATAR
VWSQALQVLGPRAAQLAAPHFPALLALVMTPIGTPMDTSLFYVPPRARSEHNIDRGILAQ
DLTLVSTDTVLRGRLGAASALGDLLALAPPSSETCKLLQEALEARSALQKCLGAVVAQRW
AECVPSVSELLAIDAVRGVHATLLQLLDTSMPPIYTEMHVLLQRMQHDCHVLGQMMVRDA
HIARDRVPAVSSPCTTADAQRLAETAATLAPSCTTVVEQSRKIQRAIEQYDATKETQDVL
VLAAVAGAVVAWGVLPPKLNPLIRSLMNSIKYEENADLQARAACSIARLVRLCTLPTAHA
NPSAKIVKNLCAFVCQDTSITPLFVETKGEREGTGALPVAPPSERRASAEPETLTPSRLI
RRGAECALMHLCQQFGAQIWDELPILWTSAAEPLLHDAPMDDARGQALLDACSVLECIAP
HVHTDLHESLASLLDALVRVSQNEFRVLRGASARCFSVVTKCITDQGMHALVEQVVPVLG
SAELLCRQGAMEVVSCTVRVQDERLLPYVLFLVVPVLGRMNDSDESIRLLATNTFAELVK
LLPLIHGLPDPPHFSPALLARRETEKAFLAQLMDGSKVAPYKMPIEMKVQLRPYQMDGVS
WMAFLARYQLHGILCDDMGLGKTLQSIALLSCKHHERHERWEQTQAPDAKRIPSLIVCPP
TLTGHWVHEIETYSPNLTALLYAGHPSDRARLKAQINQVDVVVMSYDVVRNDVQDLASRS
WFYCILDEGHVICSPKTKTTRSVKQMRAQHRLILSGTPIQNNVLELWSLFDFLMPGFLGS
DQSFHERFARPVLACRSGKPSAAEKEAATLALEALHKQIVPFLLRRLKEDVLDDLPPKII
QDVECELSDIQKQLYDDFVKATDDDDEEEEEDKKNNTEPKEQQHIFQKLQYLRKLANHPS
LVLDAAVPAQKKLLEQVNANRGTLAGLSHAPKLQALRQLLLDCGIGHDTQANDAALIGAD
TGASVSQHRVLIFCQMRHMLDVIEQDLFRPLMPQVTYLRLDGTVSSDRRHSIVQSFNADP
SIDILLLTTSVGGLGLTLTGADTVIFVEHDWNPMKDLQAMDRAHRLGQKKVVNVYRLITR
NTLESSIMGLQQFKMNIANSVVTQQNKSIDQMDTDRILDLFGPSPPSDAQAETKPPPVKG
ISQKALLASLEHMPDMNEDEYADMKQWRPSAS
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtagtatgcctgcgacacgcctagataggctcgtgtctctcttggatatcggg
tcgtcgtcgctgattcgcaccaccgcggcgacgcagctaggccaaattgcggcgctgcgt
gtgcgaggggcaagcacggcgcacgagggcgcgtcctcgtcggagcccgcagtgtaccgc
ggcacggatggcgagtggaatgaagtcctgacgctcctggcccgtgtcgtgccgctcctg
ctgtccaagaactgggacacacgcatggcggcggcgcaagcgatctaccacatcacccag
gccgctggcgtatgggatcccgacacagggacggagcgccacgtatcggcccctatcaag
gcagaggagacgccgtcgttgggcgaggcggatcgcctgcagtttgcgagcttctccctg
ccgcatgtcctgcagacaggcaccaagctcctagcgtccgtgggcaaggagtacgatgtg
cctgagctcatgagtcgcgagcgacttcagcacgcaaagaaggacgtacttgggaagctg
ggcctcgggtttggcgccgacgacatggatatgggcattgatatggatgccgagctggcc
gggtccaagccggcgcccaagccggcgcctgcaccggagccggagcctggcgcagaccgt
gcactgagcgctcgcgagcgcaatcagctgaagcgcaagcgcaagctcgaggccaaggct
cagacccgcgcgccggtagcgcatgtcgagccggaaaagcgcgccaagttggacagcacc
gctcaggcctccgacaaggcggccgccgtcttttcgctgcagacgcagcgtggcgaatgg
ccctttcgtgcgctggccgagctcctcagtgtcgagttagtcagtccgacgtgggaggcg
cggcacggcgcggcgctcggtctgcgtgagctgttccggacacagggctatggcggcgga
cgcgtgatgcatgcgtcgaagcaagacaatgacgagcgccacgctgtgtggtgcgagaat
ctcgcggtgcgtctgttgtgtgtgtttgcgctcgaccggctcggcgactttgtgtttgac
catgtcgtagcgcccgtgcgagagacggcgtcgcagaccttggcgcagctgctgccgcac
atgacgaatgagctggtgcgaagtacgcatcacgtcctcctggagatggtgcggcaggac
tcggtgcgggaggcgcagctggtcggacgcgaggggcagcggccttatatttgggaggtg
cggcatgcgggcctgctcggcatcaagtacgaggtgatgatgcgcgtcgatgtcctgggc
gtggaggacgatatgctgtcggatgtgctggacgtggctcagctaggactccgcgacaat
gacgacgacgtgcgcgccgtagcagctgcgatgctcctgcccatcacctcgaacatcgtg
tcgcaccaactcgcgcgcgtatcggacctgctggatcagctgttcgtctgcgtcagcgac
aagcgcgatgacctgtcgagcagcgccgccagcgtcatggacctgctcgcgtcgctcatg
tctcacgccgaggtgctgggcatcatcgacgtggcatcgcttgcgcagcgcgttacgatg
ctcttccgctttttccggcacaccatcaccaacgtgcgtctgtcgatgctcaatgccatg
catgccctgctgcaatgctcgtcgctgccgcacgactgggtcacggacgacctcattcga
ctgctgctccaaaacatgctcgtcgaagaacgcgctcccatccgcgaggccactgcgcgc
gtatggtctcaggccctccaggtgctcggcccgcgcgccgctcagctcgccgccccgcat
tttcccgcgctcctggccctggtcatgacgcccatcggcacgccgatggacacgtcgctg
ttttatgtgccgccgcgcgcgcggtcggaacacaatatcgatcgtggcattctcgcacaa
gacctgaccctggtcagcacagacaccgtgctgcgcggacgtttgggcgctgcgtcggcc
ctgggcgacttgctggccctcgcgccgccgtcctcagagacgtgcaagctactgcaagag
gcgctcgaggcgcgctcagcgctgcaaaagtgcctcggcgccgtggtggcgcagcgatgg
gccgaatgtgtaccgagtgtcagcgagctgctggccatcgatgccgtgcgtggcgtgcac
gcgacgctcctgcagctgctcgacacatccatgccgcccatctacacggaaatgcacgtc
ctgctgcagcgcatgcagcacgactgccacgtcctgggccaaatgatggtccgcgacgcc
cacatcgctcgggatcgtgtgccggccgtatccagcccatgtacgacggcagacgcccaa
cggctggccgagacggccgctaccctcgcaccctcctgcacgactgtcgttgagcagagc
cgcaagattcaacgtgcgatcgagcagtacgatgccacgaaggaaacgcaggacgtgttg
gtactcgctgccgtagccggcgccgtcgtcgcatggggcgtgcttccgccgaaactcaac
ccgctcatccgcagcctgatgaacagcatcaagtacgaagagaatgcggatctgcaggct
cgcgccgcctgctcgatcgcccgcctcgtgcgtctatgtacgctgcctaccgcgcacgcg
aatcccagtgccaagatcgtcaagaatctgtgtgcgttcgtgtgccaagacacgtcgatc
acgccgctctttgtcgagaccaagggcgagcgcgaaggcacaggcgcattacccgtcgct
ccgccatcggagcggcgtgcatcggcggagcccgagacgctgacgcccagtcgcctcatt
cgccgcggcgccgaatgtgcgctgatgcacctgtgccagcagtttggcgctcagatctgg
gacgagctgccgatcctctggacatctgcggccgaaccgctcctccacgatgcgcccatg
gacgacgcgcggggccaggcgctcctagacgcatgctccgtcctcgaatgcatcgcgccg
catgtgcacaccgacctgcacgaatcgctcgcatcgctgttggacgcgcttgtgcgtgtc
tcgcagaacgaattccgcgtactgcgtggtgcgagtgcgcggtgctttagtgtggtgacc
aagtgcatcacggatcaggggatgcatgccctggtcgagcaagtcgtgccggtgctcggc
tcggcggaactgctgtgccggcagggcgcgatggaagtcgtgtcgtgcacggtgcgtgtg
caggacgagcgcctgctgccgtacgtgctcttccttgtcgtgcctgtgctcggccgcatg
aacgacagcgacgagtcgatccggctgctggcgacgaacacgtttgccgagctcgtcaag
ctcctgcctttgattcacggcttgcctgacccgccccacttttcgccagcgctgctcgct
cgccgcgagaccgagaaggcgttcctcgctcagctgatggacggctccaaagtcgcgccg
tacaagatgccgatcgagatgaaggtccagctccggccgtaccaaatggacggcgtcagc
tggatggccttccttgcccgataccaactgcacggcattttgtgcgacgatatgggtctc
ggaaaaacactgcaatccatcgcgctcctgtcgtgcaagcatcatgagcggcatgagcgg
tgggagcagacacaggcgcccgatgccaagcgcatcccgtctctgatcgtgtgtcctccg
acgctcacaggccactgggtccatgaaattgagacctactcgccgaacctcacggccttg
ctgtatgccgggcacccaagcgatcgcgcgcgactcaaggcgcagatcaaccaggtcgat
gtcgtcgtcatgtcgtacgatgtggtcaggaacgacgtccaagacctagcgtcccgatca
tggttctactgcattctcgatgaaggccatgtgatctgcagtcccaagacgaaaacgaca
cgcagcgtcaagcagatgcgggcgcagcaccgcctcattctctccggcacgccgatccag
aacaatgtgctcgaactgtggagcttgttcgactttttgatgccgggctttttgggctcg
gatcagtcgttccacgagcgctttgcgcggcctgtcctggcgtgtcgctcaggcaagccc
agcgccgcagaaaaagaagctgccacattagcgctcgaagctctgcataagcaaatcgtg
ccgttcctgctgcgtcgtctcaaggaagacgtgctggacgacttgccgcccaagattatt
caggatgtcgaatgtgaattgagcgacatacaaaagcagctgtatgacgactttgtcaag
gccacggacgacgacgacgaggaggaggaagaagacaagaagaacaacaccgagcccaag
gaacagcagcatatattccaaaagctgcagtacctgcgcaagcttgccaatcatccctcg
ctcgtactcgatgccgccgtgccagcccaaaagaagctgctagagcaagtgaatgcgaac
cgcggcacattggccgggctgtcgcatgcccctaaacttcaggcacttcgacagctgcta
ctagactgtggtattggtcacgacacacaagcgaatgatgctgcgctgattggcgccgac
accggcgcatcggtgtcgcaacaccgcgtgttgattttctgccaaatgaggcacatgctc
gatgtcattgagcaggacctgttccgcccgctcatgccccaagtgacgtaccttcgccta
gacggcacggtaagcagtgatcgtcggcacagcattgtacagtcctttaatgccgatccc
agcattgatatcctcctgcttaccacgtcagtcggtggtctgggccttaccttgaccggc
gctgataccgtcatctttgtcgagcacgactggaatcctatgaaagatttacaagcgatg
gatcgggcacaccgcctcggccagaaaaaggtcgtcaatgtgtaccgcttgatcacacgc
aacaccctcgagtcgtccatcatgggtctgcaacagttcaagatgaacatcgccaactcg
gtcgtgacgcagcaaaacaagtccatcgaccaaatggacactgaccgcatcctcgacctg
ttcggcccctcgcctcccagcgacgcccaggccgagaccaagcccccacctgtcaagggc
atcagccaaaaggccctgctggctagcctggagcacatgcccgatatgaacgaagacgag
tatgccgacatgaaacagtggcgcccttccgcttcatag
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