Malassezia restricta: MRET_2163
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Entry
MRET_2163 CDS
T06113
Name
(RefSeq) ATP-dependent RNA helicase UAP56/SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
mrt03015
mRNA surveillance pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2163
09122 Translation
03013 Nucleocytoplasmic transport
MRET_2163
03015 mRNA surveillance pathway
MRET_2163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_2163
03041 Spliceosome [BR:
mrt03041
]
MRET_2163
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MRET_2163
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MRET_2163
Spliceosome [BR:
mrt03041
]
Complex C
Other components
EJC/TREX
MRET_2163
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MRET_2163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
ResT-TelK_cat
Motif
Other DBs
NCBI-GeneID:
38738929
NCBI-ProteinID:
XP_027484673
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All DBs
Position
III:863610..864917
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AA seq
435 aa
AA seq
DB search
MENEDLIDYEEEVSVPTSGAAQTDAGASAGAPAASGADEGNKKGSYVGIHSTGFRDFLLK
PELLRAISDLGFEHPSEVQQECIPQSILGMDVVCQAKSGMGKTAVFVLASLQQLEPVDGE
VSVIVLCHTRELAYQIRNEYARFTKYMPEVRTAVVYGGTPIKEDQAMLADKTKCPHILVG
TPGRMTGLVRDKSLKASEVKHFVIDECDKILDNLEMRRDVQEIFRATPHHKQVMMFSATL
AKEIRPTCKKFMQNPLEIYVDDETKLTLHGLRQYYVRLEEAAKNRKLNDLLDTLEFNQVI
IFVKSISRANQLDQLLRECNFPSICIHGALAQDERIKRYQQFKNFEKRILVATDIFGRGI
DVERVNVSISYDTPSDADSYLHRVGRAGRFGTKGLAITFVSSDEDAEVLKQIQSRFEVAV
PELPDSIEASTYMNA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaagatcttattgattacgaggaagaagtgtcagtgcctacctcaggcgcc
gctcagacagatgctggtgcatcagccggtgctcccgccgccagtggtgctgatgaaggc
aacaagaagggaagctatgtgggtattcactcaaccggcttccgtgacttcttgttgaag
cccgagcttttgcgtgcgatcagtgatcttggtttcgagcacccatcggaagtccagcag
gagtgcattcctcagtcgatcctgggtatggatgtggtgtgccaggccaagtcgggtatg
ggtaagacggctgtgtttgtactggcgtcgctgcagcagctcgagcctgtggacggtgaa
gtctccgttattgtgctgtgccacacgcgtgagctggcctaccaaatcagaaatgagtat
gctcgtttcacgaaatacatgcccgaggtgcgcacggccgtggtctatggtggcacaccg
atcaaggaggatcaggccatgctggctgacaagaccaagtgcccccatattctggtgggt
acaccgggtcgtatgactggtctggtgcgtgacaaatcgctcaaggccagcgaagtgaag
cattttgtgattgacgagtgtgacaagatcttggacaaccttgagatgcgtcgggacgtg
caagagattttccgtgccacgccgcaccacaagcaagttatgatgttcagtgcgacactt
gcgaaagagattcgcccaacgtgtaaaaagttcatgcagaaccctctggaaatctacgtc
gatgacgagacgaagctcacgctgcatggtcttcggcagtattatgtgcgccttgaagag
gccgccaaaaaccgtaagctgaatgacctgctcgacacgctcgagtttaaccaggtgatt
atctttgtcaagtccatttcgcgcgccaaccaactggaccagctgctgcgtgagtgcaac
ttcccatccatttgcatccacggtgccttggctcaagacgagcgtatcaagcgctaccag
caattcaagaacttcgaaaagcgtattctggtggccacggacatctttggacgtggtatc
gacgtggagcgtgtgaacgtctcgatcagctatgacacgccctctgatgccgactcgtac
ctgcaccgcgtgggtcgggctggccgtttcggtaccaagggtctcgctatcacatttgtg
tccagcgatgaggatgccgaagtgctcaagcagattcaaagccgcttcgaggttgctgtg
cccgagctgcccgactcgatcgaggccagcacatacatgaacgcatag
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