Malassezia restricta: MRET_2174
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Entry
MRET_2174 CDS
T06113
Name
(RefSeq) ATP-dependent RNA helicase DDX5/DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_2174
03009 Ribosome biogenesis [BR:
mrt03009
]
MRET_2174
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MRET_2174
Spliceosome [BR:
mrt03041
]
Complex A
U1 snRNP components
U1 related factors
MRET_2174
Complex B
MRET_2174
Ribosome biogenesis [BR:
mrt03009
]
Eukaryotic type
Pre-60S particles
Helicases
MRET_2174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
38738940
NCBI-ProteinID:
XP_027484605
LinkDB
All DBs
Position
III:join(877848..879228,879256..879590)
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AA seq
571 aa
AA seq
DB search
MSYGGYNGSNDAGSGGYRGGYGGGYRGGYGGGQGGGYGGGYGGGYGSGYGGGYGGGYGGG
YGGGYGGGYGGGYGGGYGGGYSGEELGAGLNKATWSEADLVPFEKNFYKEDPRVTERSDE
QVAEFRRAKEITLRGSNVPKPVMTFDETGYPDYIMREINKLGFTEPSPIQSQAWPLAMSG
RDLVAIAETGSGKTIGFALPSFVHIKAQPPLQYGDGPIALILAPTRELAVQIQNECSRFG
SPCRVRTASVYGGVPKGPQIRALQRGAEIVIATPGRLIDMLAIGKTNLRRVTYLVMDEAD
RMLDMGFEPQIRKIVEQIRPDRQTLMFSATWPKEVQRMAADFLNDYVQVNIGSMELTANR
NVKQVIEMCSEFDKRGRLIKHLEQISQENGKVIIFANTKRGADDLTKFMRQDGWPALAIH
GDKQQDERDWVLREFKSGNSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRT
GRAGRKGVAVTFFTSENAKSARELVGLLRDAEQEIPPELQEMVRYSGGGGGGGYRGRGGR
GRGRGRGGGFGGRRFGPRSSGANNIQVGSRW
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacggtggatacaacggctcgaatgacgctggtagcggcggttaccgtggtgga
tacggtggcggctaccgtggtggatatggcggtggccagggtggtggctacggcggtggc
tacggtggtggctacggtagtggctacggcggtggctacggcggtggctacggcggtggt
tacggtggtggctacggcggtggctacggtggtggctatggcggtggctatggcggcgga
tatagcggcgaagaactgggtgcgggcctcaataaggccacttggtctgaggcggatctc
gtgccatttgagaaaaacttttacaaggaggatccgcgtgtaactgagcgttctgacgag
caggtcgctgagtttcgccgagccaaggagatcacgctccgtggctccaatgtgcccaag
cctgtgatgacctttgacgagactggataccccgactacatcatgcgtgaaattaacaag
cttggatttacggagccttcgccgattcagtcacaggcctggcctctggcgatgagtggt
cgtgaccttgtggcgattgccgagacaggttcgggcaagacgattggctttgccctgccg
agttttgttcatatcaaggcgcagccgccgttgcaatatggcgacggtcccattgcgctg
attcttgcgccgacgcgtgaattggccgtgcagatccagaacgagtgcagtcgctttggc
tcgccgtgccgtgtgcgcacggcctcggtgtatggtggtgtgcccaagggaccgcagatc
cgtgcattgcagcgtggtgccgagattgtgattgcgacgccaggacgcttgattgacatg
ttggcgattggcaagacgaatctgcgccgtgtgacgtatctggtgatggatgaggcggac
cgtatgctggatatgggctttgagccgcagattcgcaagattgtcgagcagattcgccct
gatcgccagacgctcatgttctcggcgacgtggcctaaagaagtgcagcgcatggccgcc
gactttttgaacgactatgtgcaagtcaacattggctcgatggaattgacggccaatcgc
aacgtgaagcaggtgattgaaatgtgctctgaatttgacaagcgcggacgcctcatcaag
cacctcgagcagatcagtcaggagaacggcaaggtgatcattttcgcgaacacgaagcgc
ggagccgatgatctgaccaagtttatgcgccaggatggctggcctgccctggcgattcat
ggtgataagcagcaagacgagcgtgattgggttttgagggagttcaagtcgggtaacagc
cctattatggtagcgacggctgtggcctcgcgtggtttggatgtcaaggacatcagctat
gtgatcaactacgatttcccgacgaacacggaagactatgtccatcagattggacgtacg
ggacgtgccggccgtaagggtgtggccgtcacgttcttcacgagcgagaacgccaagtcg
gctcgcgagctggtcggcctcttgcgggacgccgagcaggagattcctccggagctgcag
gagatggtgcggtatagcggcggcggcggcggcggtggataccgcggtcgtggcggccgt
ggccgtggccgtggccgtggcggcggctttggcggtcgccgctttggcccccgcagctca
ggggccaacaatattcaagtaggttcgcggtggtaa
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