Malassezia restricta: MRET_2392
Help
Entry
MRET_2392 CDS
T06113
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
mrt
Malassezia restricta
Pathway
mrt03018
RNA degradation
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2392
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_2392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_2392
03041 Spliceosome [BR:
mrt03041
]
MRET_2392
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MRET_2392
mRNA degradation factors
5'-3' decay
Lsm complex
MRET_2392
Spliceosome [BR:
mrt03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
MRET_2392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
38739158
NCBI-ProteinID:
XP_027485091
LinkDB
All DBs
Position
IV:complement(join(43798..43830,43856..43928,43952..43979,44005..44125))
Genome browser
AA seq
84 aa
AA seq
DB search
MSATILPLELVDRCIGSSIWVVMKGQREFVGKLLGFDDYVNMVLEDVTEYENTPDGYKKV
HLSKTLLNGNNICALVPGGEGPEH
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgacgattctgccactggagctcgtggatcggtgtattggcagcagcatctgg
gtcgtcatgaaggggcagcgcgagtttgtcggcaagctcctgggctttgacgactacgtg
aacatggtgctggaagatgtgacggaatacgaaaacacgcccgacggctacaaaaaggtg
catctgtccaagacgctcttgaatggcaacaacatctgtgcgctcgtgcctggtggcgaa
ggccccgagcactaa
DBGET
integrated database retrieval system
