Malassezia restricta: MRET_2413
Help
Entry
MRET_2413 CDS
T06113
Name
(RefSeq) U3 small nucleolar RNA-associated protein 20
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrt03009
]
MRET_2413
Ribosome biogenesis [BR:
mrt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MRET_2413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
38739179
NCBI-ProteinID:
XP_027484896
LinkDB
All DBs
Position
IV:75306..82814
Genome browser
AA seq
2502 aa
AA seq
DB search
MGDTPGVHRYVSFHERLKHINIDLARESGTTWGAASGLQVSGLDAPASVFAEATGAADVS
TVAEASDIHSTAFGTALEQWYELNLSLPFHTFHARVMPMAQSLVLLLHHRDEIAAALDTF
LSDTQHWLAWDALLDLVPRMAFDLGPEFLHVYQRLLTAVLRASCTMHKNLTHGDDALAAR
IVERAFHSAAWLFRAVSSLMRTDAPDILLTSWSIVRGVLIDKQTTSHAWRFATEALSHLI
RKAPISHLHALQARMIADADDASAEGIAATWANSCQSASHTLHSRTREMLSCVLVLDAQP
VELVRRLGSWIITSLVHHAHAEDMDPVFDMLLCADASGDALHTQLVWITTAVGTRKGTRV
SDDAEARLLGWLLHLDERLVWTADHVPLLEAYTALVSAALLRARVQDMTSHGKRLLDAFA
QRPTRDHFAVPWSALHGLIRVLSDPAVAWRSFRAFGLPGALDATTRALEVDEASALALLV
QLESQGHLAPLLEAPPTTVVLRWAKRMRHTVQRRIDALAEHLERTSLDTAGWECLLAVPL
AYLFPAHIDTLATSLVRCIHAAKDADVLGILMASLVRCKATRAISDMLADTNTFVRLLQP
NRAVLPAMADMVRMSQRQLDVSVVWPCLTDAIRDSDRVLVRAALDILASTVHDTTNVFKM
LSDVEGMALEVQTIATRNTKLRQTQREACRVLARDDIQLEALVHYTVGTLRLNFRPVWAA
SRDTLVALCSAVPESVWRVSFAELRMTEALLQQGTLRVPASVESEAEEDVETTALASLTD
AAWQQRWQWMQRHLCLTSTSPTTMAQDMLHARSAAPDVRLDVAHYASEILRLYAQHVSLP
ERHSAAFVPHVQAQWTSIVDADEAVMPTALRAERLRLILDVFGAFHHAARMHDAADMKAR
FLALCADPELVVQRAALDCLLTWRDAWLVAHTEKLHALLEPAKFRDTLAQLDLSASSEQW
GSARPLTMQVILRLLYGMLVSRRGLRTSGAGQGARRTAILAALFECAPDELGLLADLMLT
SFADRLPEPRKQLGFLGLLGDVLEHLGKPLAPSMPRFVHVVIAIAASAEPSDPTMRLLRR
TALRRLADLVRYAHVDWAPFRTRILDDIVLPRLKTFAEDSVQSPSSLLDLCNAWASQHST
LLCFLSDERVLSGVYAGLSSASIKPAVAHTILDIAERIHDAASDDDEVRDVIVAPTAPAL
LTHLVPLVRHTVHASFAYELASRERDELLRKELSTMSYLAPHMTRADEAAAVLHLLVPLM
EHSARAVQERVKTELLRTVTLLLPRAGHAGPDVDVLYALFARLGAELQSPPARAQYTLAL
SELANIDHGLKRVTTWVAQLNAYHKLHEPDMDTRLEAWDAILAPSPAIDAREWHALLYQA
LFFVMDTDELVLRTNAAALLQHFVKASVSVDTLPLVRDVFLPSVYRRLHTRAEPVRKELF
NVLGVAVAELHTHLPPLAELHVLLAGDDEASVFTNLFHIQAHRRVRAMHRLADAASQLRS
KTLSELLVPLVWHFLLPNASGGIDMNMANEALACIRRMASHLQWGHYYFWLKRFLRELQE
HVAKDDTSATERLHVRGIVGVLEAFHFDCTQHVDHVDEDATPTQPDGPPAAVSLHLATTI
STRVLPPLYEALHADENRLPPRLPLIVGAARLALHLPADRRPVELFKVFGELGRALRSKL
QSTRDTCRAIALQMLQAIGATYLPDVVHELRRMLTRGPQLAVCAYTIHSLLVALSTGDAP
PLTLLDRGVRDITEAVMEDLFGLTSEDRVTVEFRTKVRELRQSKSLDSFEHLARLADPAS
LQELLIPLRGVLATSIEPKVVHTAHECLHRIASGMSANPHLDAQAFLVLCYTLIARGEKA
LQSRVDQAPHLAQNAHLFVELGLDLLTTALRRSRFDMHDQDTVAKLVPLIRAVGETLYAR
HAPVVERGLRAAAALARCPLPTLDEALPVMQKQMLVLLRHAGGIHSAIAQTTLRALSVVI
REGRAKAPPAQHLTELLHLVSSDLDAPESQGSIFALLRAIVSRAFVVPEIYDVMDRIAEL
LVTSHDAQVREVCRSLYLAFLLDYPQGHGRLKNQLEFLAKHLAYESEGGRRSVLELVGAI
LAKFSPEVVAQYAQLFFVALVMQLANEESTACRKQAADVLGTLLHVLPANERDGLLRMTR
PWAMAQGTPQAQKLAAVALRVYDIAAASECPAWAAQDAATAVAHVLTHSAEAMDEDVVSW
HLTYQALQTMQTLARDAHAWTSLAACIPHVLTLLTLPHAWCRIAACRVLGAYFAAGHTLD
ASEYVRAARQLVAQLYSAFLDDALVLQIVRNLVFLGKAFANGDADGVEDSDSDDVEDDVA
PRLAWLYTKLSHTARLDDGHTRPASGPQRVGAVLKWFAAMATQLDASITTHFLVHILSPL
QRVTDDEQAPDDLKTLASEVQDLIQAQVETTAFTRAYAHVKQTRLEKRRVRKHERLMEDV
MDPERAAKRRASRNTAKHESRKRKHAHFRDIRQSGKRTKKTD
NT seq
7509 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacactccaggcgttcaccgctatgtgtcgttccacgagcggctcaagcatatc
aatatcgacctggcgcgtgagtctggtaccacatggggtgcagcatcgggcctacaagtg
tcgggcctggatgcgcctgcgagtgtgtttgctgaagcgacaggcgcagccgatgtctcg
accgtggccgaggcgtccgacatacacagcacggcgtttggcacggcgcttgagcagtgg
tacgagctgaacctgagtctaccattccacacattccatgcgcgtgttatgcccatggcc
cagtctctcgtgctgctcctgcaccaccgcgacgagatcgccgctgcgctcgacacgttc
cttagcgacacgcagcactggctcgcatgggacgcgctcttggatcttgtgccgcgcatg
gcctttgacctaggacctgagtttttgcatgtgtaccaaaggcttcttaccgccgtgttg
cgtgcttcgtgcacgatgcacaagaacctgacgcacggcgacgatgcactagctgctcgg
attgttgagcgcgccttccacagtgctgcatggctttttcgtgccgtgtcgtcgctcatg
cgaactgacgctcccgatatcctacttacgagctggtcgattgtgcgtggcgtcttgatc
gacaagcagaccacatctcatgcatggcgctttgctacggaagctctatctcatcttatc
cgcaaggcgcccatctctcacctccatgcactccaggcacgcatgatcgctgatgccgat
gacgcatcggcagaggggatcgctgccacatgggcgaatagctgccagtccgcctcccat
accctgcactcaagaactcgagagatgctgtcctgtgtgcttgtgctggatgcgcagcct
gttgagttggtccgccgccttggatcatggatcatcacctcgttggtgcatcacgcccat
gcggaggacatggaccctgtctttgatatgcttctgtgtgctgacgcatctggcgacgct
ttacatacgcagctggtgtggatcacgacagctgtgggcacacgaaaagggacgcgcgta
tctgatgacgctgaggcgcgcctactaggatggctcctgcacctggacgagcgacttgtg
tggaccgcggaccatgtaccgctcctcgaggcgtatacggcactcgtatctgcggcgctt
ctccgtgcacgtgtccaggacatgacatcgcatggcaagcgcctactagatgcctttgca
cagcggccgactcgcgaccactttgctgtgccttggtcagcgctgcatggcctgatccgc
gtcctcagcgatcccgccgtggcatggcgcagctttcgcgcctttggcctgccaggtgcc
cttgatgccacgactcgagcgttggaagtggacgaggcgtccgctttggcgctgctagtg
cagctcgagtctcaaggtcacttggcgccgctcctcgaggcgccgccaacgacggtggtc
ctccgctgggcgaagcgcatgcgccacactgtccagcgccgtattgatgcccttgccgag
cacctcgagcgcacctcgctggataccgctgggtgggagtgcctgctggctgtcccactc
gcatacctctttccagcgcacatcgatacgctcgcgacgtcgctagtgcggtgcatccat
gcggctaaggacgccgacgtgctgggcattctgatggcgtctcttgtgcgctgcaaagca
acgcgcgcgatcagtgacatgctggcggatacgaacacgtttgtgcgtctgctccaaccg
aatcgtgccgtgctcccggccatggctgacatggtgcgcatgtcccagcgtcagctcgac
gtgtcggtcgtatggccttgtctcactgacgccatccgcgactcggaccgcgttctcgtg
cgtgcggctctcgatatccttgcgtcgacggtacacgacacgaccaacgtattcaagatg
ctctccgatgttgagggcatggcactcgaagtccaaacgatcgcgacgcgcaacactaaa
ctgcgacagacgcagcgcgaggcatgccgcgtccttgcgcgcgacgacatacagctcgaa
gcactcgtgcactatacggtcggcacgctccggctcaatttccggccagtgtgggccgcg
agtcgtgatacgctcgtagccctgtgctcagcggtgcccgagtccgtgtggcgtgtctcg
ttcgccgagctccgtatgacggaggctcttctccagcaaggcacgcttcgagtgcctgct
tctgtggagtcagaggctgaggaggacgtggagaccacggcccttgcttcgctgaccgat
gccgcctggcagcagcggtggcagtggatgcagcggcacctatgccttacgagcacgtcg
cccacgactatggcgcaagacatgctgcatgcgcgcagcgcagcgccggatgtgcgactg
gacgttgcacactatgcgagcgagatactgcgtctgtatgcgcagcacgtatcgctgcct
gagcggcacagtgcagcgtttgtgccgcatgtccaagcgcagtggacgtccatcgtcgat
gctgacgaggcggtcatgccgacggcgctgcgtgctgagcgcctgcgtctcattctcgat
gtgtttggtgccttccatcacgctgcacggatgcacgacgcggctgacatgaaggcgcgg
ttcctggctctgtgtgcggatccggagctggtcgtgcagcgtgcggctctggactgcctt
ctgacgtggcgagacgcatggctcgttgcgcacacggagaaactgcatgcgcttctcgag
cccgccaagttccgcgacacccttgcgcagctcgatttgtccgcctcgtccgagcagtgg
ggctcggcacggccgctgacgatgcaggtcatcctgcgcctcctgtatggcatgctggtc
tcacggcgcggtctgcgcacgagtggggcaggccaaggcgcgcggcgcacggccattctt
gcggcgctattcgagtgtgcgcccgatgagctgggcctgctagctgacctcatgctgacg
tcgtttgcggatcgtctccctgagccacgcaagcagctcggtttcctcggtctgctgggc
gacgttctcgagcatctaggcaagccgcttgctccctcgatgccgcgcttcgtgcatgtg
gtcattgcgatcgcagcgagcgccgagcccagcgatccgacgatgcgcctgctccgccgg
acggcccttcggcgacttgctgatcttgtgcgctacgcccacgtcgactgggcgccgttc
cgcacgcgcatcctcgacgacattgtactcccgcgtctgaagacgttcgccgaggacagt
gtccaatcgccatcgtccctcttggatctgtgcaacgcatgggcctcgcagcactcgacc
ctgttgtgcttcctcagcgacgagcgcgtcctgagcggcgtgtatgccggtctgtcgagc
gcgagtatcaagcctgctgtggcgcacacgatcttggatatcgctgagcgtattcacgac
gcggcgagcgacgacgacgaagttcgcgacgtgattgtggcgcccacagcgcctgcgctg
ctcacgcaccttgtgccactcgttcgacacacggtacacgcgtcgttcgcctacgaactc
gcctcgcgcgaacgtgatgagctcctgcgcaaagagctcagcaccatgtcatacctggcg
ccgcacatgacgagggccgacgaggcagccgccgtacttcatctgctcgtgccgctcatg
gagcacagtgcacgcgccgtgcaagaacgcgtcaagacggaactcctgcgcacggtgact
ctcctcctgccgcgcgccgggcatgccggcccggacgtcgacgtgctgtacgctctcttt
gcgcgcctcggagctgagctccagtcgccgcctgcacgcgcgcagtacaccctggcgttg
tctgagctcgccaacattgaccatggtctgaagcgcgtcacgacatgggtcgcacagctc
aatgcgtaccacaagctgcatgagccggatatggatacgcgtctcgaggcatgggacgcc
atcctcgctcctagcccagccatcgacgcccgcgaatggcatgctctcctgtaccaggcc
ctttttttcgtgatggacaccgacgagctcgtgctccgtacgaatgccgctgcgctgctc
cagcactttgtcaaagcgtccgtgagcgtggataccctccccctggtgcgcgacgtgttc
ctgccgtccgtgtaccgccgcctgcacacgcgcgctgagcccgtgcgcaaggagctgttc
aacgtgctgggcgtcgccgtcgccgagctgcacacgcacctgccgccgttggcggagctg
cacgtcctccttgccggcgacgacgaagcaagtgtattcacgaatctcttccatatccaa
gcgcaccgccgcgtgcgcgccatgcaccgcctcgcagacgcagcgagtcagctgcgcagc
aagacgctctctgagctcctcgtcccgctcgtctggcactttctgctgcccaacgcctcc
ggtggcatcgacatgaacatggcgaacgaggcccttgcgtgcatccgccgcatggcctcg
cacctgcagtggggccactactacttttggctcaagcgcttcctacgcgagctccaggaa
catgtggcgaaggacgacacgtccgctacggaacgactgcacgtgcgtggcattgtcggt
gtgctggaagcgttccacttcgactgcacccagcacgtggaccatgtggatgaggatgcg
acaccgacacagcccgacgggccgccggccgccgtgtccctgcaccttgccactacgatc
tcgacgcgtgtccttccgcctctctacgaggccctgcatgcggatgaaaaccgtctgcca
ccccgtctgcccctcattgtcggagccgcgcgtctggcgctgcatctcccggcggaccgc
cgccccgtcgagctgttcaaggtgtttggcgagctgggccgtgccctccgcagcaagctc
cagtcgacgcgcgatacatgccgagcgatcgccctccaaatgctgcaggcgatcggcgcg
acgtacctgccggacgtcgtgcacgagctccggcgcatgctcactcgcggcccgcaacta
gccgtatgtgcttacacgattcacagcctgcttgtcgcgctcagcaccggggacgcaccg
cctctcacactgctggaccgcggcgtgcgtgatatcaccgaggccgtcatggaagacctg
tttggcctcaccagtgaagaccgcgtgaccgtcgagttccgcaccaaagtcagggagctg
cggcagagcaagagtctcgactcatttgagcacctcgctcgtctcgccgatccagcgtct
ctgcaagagctcctcatccccctgcgcggcgtcctcgccacgtccatcgagcccaaggtc
gtgcacaccgcacacgaatgtctgcaccgcatcgcatccggcatgagtgcgaatccgcat
ctcgatgctcaagcgttcctcgtgctgtgctacaccctcattgcccgcggtgaaaaggca
ctccaaagccgcgtcgatcaagcgccccacctcgcacaaaacgctcatctgtttgtcgag
cttggcctcgatctgctcacgaccgcacttcgtcgctcgcgcttcgacatgcacgaccaa
gacacggtcgccaagctcgtgccgctgattcgggcggtcggcgagacgctgtatgcgcgc
catgcacctgtcgtcgagcgtggcttgcgtgccgctgcggccctcgcacggtgcccactg
cccacgctggatgaggctctgcccgtcatgcaaaagcagatgctcgtacttctccggcat
gccggcggcattcactccgccatcgcacaaacgacactccgtgctctctctgtggtcatt
cgcgaaggccgcgctaaagcgccaccagctcagcacctcaccgagctcttgcacctcgtg
tcgtcggacctggacgcgcccgagtcccagggcagcatctttgctctactgcgcgccatc
gtgtcacgcgcgtttgtcgtgcctgagatctacgatgtcatggaccgcatcgccgagctg
ctcgtcacgagtcacgacgcgcaagtccgcgaggtgtgccggtccttgtacctcgccttc
ctcctcgactatccacagggccacggccgtctcaagaaccagctcgagttcctcgcgaag
catctcgcctacgaaagcgaaggcggccggcgcagcgtcctggagctcgtcggcgcgatc
ctcgccaagttctcaccagaagtcgtcgctcagtacgcacaactcttctttgtggctctc
gtgatgcagctggcgaacgaagaatcgacagcctgcagaaagcaagcggccgatgtgctc
ggcacactcctgcatgtcttgccagccaacgagcgcgatggactcctgcgcatgacccgg
ccgtgggccatggcgcaaggcacgccccaagctcagaaactcgctgccgtggctttacgc
gtgtatgacattgccgcagcgtccgagtgccctgcctgggcggcccaggacgcagctacc
gctgtggctcatgtgctcacccacagcgccgaggccatggacgaggatgtcgtgtcatgg
catctgacctaccaggccctccaaaccatgcagacactggcgcgggacgcccatgcatgg
acctcgctcgccgcctgtataccccacgtcctcactctgcttacgctgccgcacgcctgg
tgccgtatcgcggcatgccgcgtcctcggcgcgtactttgccgcgggccataccctcgac
gcgagcgagtacgtccgtgccgctcggcagctcgtggcacagctgtacagcgcctttctc
gacgacgctcttgtcctccaaatcgtgcgcaacctcgtctttctcggcaaggcgtttgcc
aatggcgacgcggatggtgtcgaggacagcgacagcgacgacgtcgaggacgatgtcgct
cctcgtctcgcctggttgtatacgaagctgtcgcacacagcacggcttgacgacggccac
acaagaccggcttcaggtccacagcgcgtcggtgccgtcctcaaatggtttgcagcgatg
gcgacacagctcgatgcgtcgatcaccacccactttctcgtgcacattctctcgcccctc
caacgcgtcacggacgacgagcaggcacccgacgatctcaagacactcgcgagcgaggtg
caagacctcatccaagcacaagtcgagaccaccgcctttacacgggcctatgctcacgtc
aagcagacgcgtctcgagaagcggcgcgtccgcaagcacgagcggctgatggaagacgtc
atggaccctgagcgggccgccaagcggcgtgcatcgcgcaatacagcaaagcacgagagc
cgaaaacgcaagcacgcgcactttcgcgacatacggcaatctggcaaacggaccaaaaag
accgactag
DBGET
integrated database retrieval system
