Malassezia restricta: MRET_2572
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Entry
MRET_2572 CDS
T06113
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_2572
Spliceosome [BR:
mrt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
MRET_2572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
38739338
NCBI-ProteinID:
XP_027485112
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All DBs
Position
IV:328986..330464
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AA seq
492 aa
AA seq
DB search
MASDQSAAAPEAGQKRPRTPEEEIKGAEYWEEQASKVARKACVRRDLYLDTIHRDRLDFD
VERVCSVSLSRTNVYACLVCGKYFQGRGPKTHAYFHSIDESHHVFMHLDTTRVYVLPDNY
AVDDPSLADIQYQFELTFSDEQLAQLDAPEQLSRDLHARTYVPGFLGLNNTAHHEAINVV
LQALSHVAPLRDFFLRRRPGSDGTELLRRFGTLVRRLWNPRAFKRQVSPHEFLQQVSQAS
HGRFTASEACDPVDFLGWLLNQLHRDLVGGSASMARKTSSIITDSFQGAMRLETQNVAVR
TGLEEDASSAVRVDRAVRVDEVPFLFLAMDLPPLPVFPDGSDNMMPQVPLAHLLAKYDGK
TNQDVHGAIRRHKIKHLPPYLILHFRRFTRNRFVDERNTTVVHFSPMGLDVKALVDAPDP
QLGTTYKLMANITHEATAGTVRDQSTWSAQLHTRHVPPQWFQMHDDLVERVDPHMLFLGE
SYLQIWERVAPT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgaccagagtgccgccgctccagaggctggccaaaagcggccccgtactccg
gaggaagagataaaaggggccgaatactgggaagaacaagcatccaaggtggcgcgaaag
gcttgtgtgcgacgtgacctatacttggacacgatccatcgtgatcgtttagattttgac
gtggagcgcgtgtgcagcgtctcactttcgcgcaccaacgtgtatgcctgcctggtttgt
ggcaaatactttcaaggtcgagggcccaagacccatgcctactttcactcgattgatgaa
tctcatcatgtgtttatgcacctcgatacgacgcgggtctacgtattgccggacaattac
gcggtcgatgacccgtcgctcgctgatatccagtatcaatttgagctcaccttctcggat
gagcagctagcgcagcttgatgcacctgagcaactgtcgcgcgacttgcatgcgcgcaca
tacgttcccgggtttctgggcctgaataatacggcgcatcacgaggccatcaatgtggta
ctgcaggccttgtctcacgtggcaccacttcgcgacttttttcttcgtcgaaggcccgga
agtgatggcacggagcttttgagacggtttggcacacttgttcgccgattgtggaatcca
cgtgcgttcaagcgccaagtctcaccgcacgagtttctgcagcaggtgtcacaagcgagt
cacgggcgctttacggcctcggaagcctgtgatcctgtcgatttccttggatggctccta
aatcagctgcatcgtgacttggtgggcggcagtgcctcgatggcacgaaaaacgtcgtcg
atcatcactgacagcttccaaggcgccatgcgtcttgaaactcagaatgtggctgtccgg
acagggctggaagaggatgcatcgtccgctgttcgtgtcgacagggctgtgcgcgtcgac
gaggtccctttccttttcttggcgatggatttgccgccgctaccggtgtttccagatggg
tccgacaacatgatgcctcaggtgcctctcgcccacttgcttgccaagtatgatggcaag
accaaccaagatgtacatggcgctatccgccgtcacaaaatcaagcaccttcctccgtat
ctcattcttcactttcggcggttcacacgaaatcgatttgtcgatgagcgcaatacgacg
gtcgtgcacttctcgcccatggggctggatgtgaaggcgctggtggatgcaccggatcca
cagctcggtactacgtacaagctgatggctaatataacgcacgaggcgacagcaggcacg
gtccgtgaccagagtacatggagtgcgcagctgcatacccgacatgtgccgccgcagtgg
ttccagatgcacgacgacctcgtggagcgagtcgatccgcacatgctgtttttgggcgag
tcctacctccaaatttgggagcgtgtagcaccgacctaa
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