Malassezia restricta: MRET_2584
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Entry
MRET_2584 CDS
T06113
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mrt
Malassezia restricta
Pathway
mrt03020
RNA polymerase
mrt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRET_2584
09124 Replication and repair
03420 Nucleotide excision repair
MRET_2584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_2584
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_2584
Enzymes [BR:
mrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MRET_2584
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
MRET_2584
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MRET_2584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
38739350
NCBI-ProteinID:
XP_027485216
LinkDB
All DBs
Position
IV:complement(350035..353628)
Genome browser
AA seq
1197 aa
AA seq
DB search
MYVEEGVEEISQEDCWDVIKAFFEEKGLVRQQIDSFNEFMSNTVQELVEESKSLTLEQAE
QHTGNAEDKTRRYEIEFGQIYMNKPRQTEADGSTAPLFPQEARQRNLTYSAGLHVDVSQK
VLIKGEEDELDENGDQLWIPDPSQEEIVDEKVYLGKVPIMLHSHFCWLTDLPDEDKYSLN
ECPFDSGGYFIINGSEKVLIAQERMAANHVYVFSKAPPSPITFLAEIRSAVERGGKTIST
MQIKLFSRNREKSLNNTIKATLPYIRNDIPIVIVFRALGVVPDRDILQHICYDFNDTQML
EMLKPCIEEAFVIQDREVALDFIGRRGTTTGLSRSKRTTYAQEILQKEMLPHISMSEGSN
TKKAYFFGYMVHRLLLAALDRREIDDRDHFGKKRLDLAGPLMSGLFRMLFRKVTRDIYRH
LQRCVEDQKEFHLQAAVRHATITNGLRYSLATGNWGDQKKAMQSKAGVSQVLNRYTFAST
LSHLRRCNTPIGRDGKIAKPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMSNISVGTPS
APIVEFLEEFGLTSLIDMQGADPKATKVFVNGVWLGTHDDPGQLVDTLRDLRRKDDISHE
VSVVRDIREKELRIYTDAGRLMRPLFIVDPQSMTLLIKRHHVEALNDESGEGWDWSRLVQ
SGVIEYLDTEEEETVLICMSPMDLEQSREYKATNGNMPPDTSDATRRLRSAHTFAPDTWT
HCEIHPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNYQIRMDTMANILYYP
QKPLATTRAMEHLRFRELPAGQNAIVAILCYSGYNQEDSVIMNQSAIDRGLFRSLYYRSF
QDMEKKVGVITMEEFEKPTRETAIRLKHGTYEKLDVDGLVPPGMRVSGEDIIIGKTAPLP
PDSDELGMRSKLHTKKDVSTPMKSTESGIIDQVLITTNGEGAKFVKVRVRSTRVPQVGDK
FASRHGQKGTIGITYRQEDLPFTCEGITPDIIINPHAIPSRMTIGHLVECLLSKVATLSG
QEGDATPFTDLTVKGVSDILFSLGFQSRGLEVMYNGHTGRKLQAQVYLGPTYYQRLKHMV
DDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGMANFLKERMYDASDAYR
LHICDLCGLTAVANLRKGTFECRACRNRSAISQIHIPYAAKLLFQELMSMGIATRLY
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtggaagaaggtgtagaagaaatcagtcaagaggattgctgggacgtcattaag
gccttttttgaggaaaagggtcttgtacgccagcaaatcgacagtttcaatgaattcatg
agcaatactgtgcaagagctcgtagaagagagcaaaagtcttacattggaacaggccgag
caacatacgggcaatgcagaggacaaaacgcgtcgttatgagattgagtttggccaaatt
tatatgaataagccgcgtcagacagaagcagatggtagcacggctcctctctttcctcag
gaggctcggcagcgtaacctgacgtattcagctgggcttcatgtcgatgtatcacaaaag
gtcctgatcaagggcgaagaagacgagctggatgaaaatggcgaccagctttggataccg
gatccatcccaagaagagattgtcgatgaaaaagtatatttgggcaaagtacccatcatg
cttcattcgcacttttgttggctaacggatcttccagacgaagacaagtacagtttgaat
gaatgcccctttgattccggtggctactttatcattaatggctcagaaaaagttctgatt
gcacaagagcgtatggctgcaaatcatgtatacgtattttccaaagctccaccgtctccc
attacattcctagcagaaattcgcagtgcggtcgagcgcggcggtaaaacgatcagtacg
atgcaaatcaagttgttttctcgtaacagggaaaagagtctgaataatacaatcaaggca
acgcttccatatattcgaaatgacatccctattgtgatcgtgtttcgtgcgctgggtgtc
gtcccagaccgagacattctgcaacacatttgctatgactttaatgacactcaaatgctt
gaaatgctcaagccatgtattgaggaggcctttgtgattcaggatcgcgaggtggcgctt
gactttattggccgtcgtggtacaaccaccggtttgtcgcgttcgaaacgtacaacttat
gcacaggaaatcctacaaaaagaaatgctgcctcatatttccatgtcggaaggctcaaat
accaagaaagcatacttttttgggtatatggtgcatcgtctcttgctagccgcgctggac
cgccgtgagattgatgatcgtgatcactttggtaaaaaacggctggacttagctggtccc
ttaatgagtggcctcttccgcatgctgttccgtaaagttacccgtgatatttaccgtcat
cttcagcggtgtgttgaagatcagaaggagttccatctccaggctgctgtacgacatgcc
actatcaccaatggtctacgctattcgcttgccaccggtaactggggtgaccagaagaag
gctatgcaatctaaggcaggtgtatctcaagtactcaatcgatacacctttgcctcaaca
ctatcacacctccgtcgctgcaacacacctattggtcgtgacggtaagattgccaagccg
cgtcagctacacaacacccattggggtatggtgtgtcccgcagagactcctgaaggtcag
gcatgtggtcttgttaaaaacctgagcttgatgtcgaacatctcagtcggcacgccttcc
gcaccaatcgttgagttccttgaagagtttggactcacaagtcttatcgatatgcaaggt
gctgatccaaaagccacgaaagtatttgtaaatggtgtatggcttggtacacatgatgac
cctggacagcttgtcgacacgttgcgtgacttgcgtcgtaaagatgatatcagccacgaa
gtaagtgttgtgcgtgacattcgcgagaaggagctccgtatctacacagatgcaggtcgt
ttgatgcgccctcttttcatcgtggatccacaaagcatgacgctacttattaagcgtcac
catgtcgaagcattgaatgatgaatccggtgaaggctgggactggtcacgattagtgcaa
tcgggtgtcattgagtaccttgacacagaagaagaagaaactgtgttaatctgtatgagt
ccaatggacttagagcaatcgcgtgagtacaaggccacgaatggtaatatgcccccagac
acatctgacgcaacgcgacgtttgcgttctgctcacacgtttgcaccagacacctggaca
cactgcgaaatccatccagccatgatattaggtgtatgtgcaagtattattcccttccca
gaccacaaccagtcgccgcgaaacacttaccagtcagccatgggtaaacaagcaatgggt
gtattccttaccaattaccagattcgtatggacactatggcgaacattctgtattatccc
caaaagcccctcgcaacaacacgagcaatggagcatctgcgattccgtgaattgccggcc
ggtcaaaatgccatcgtcgcaatcctatgttattcgggttataatcaagaagactcggta
attatgaaccagtcggcgattgaccgtggattattccggtcactgtactaccgctccttc
caagatatggagaagaaagtcggtgtgatcactatggaagaatttgagaagccgacacgt
gagaccgctattcgtctgaagcacgggacgtatgaaaaacttgatgttgacggccttgtt
cctcctggcatgcgtgtgtcaggtgaagatattattattggtaagacagcacctttgccg
ccggacagtgatgagttgggcatgaggagcaagttgcataccaagaaggacgtgagtaca
ccaatgaaaagcactgagagcggcattatcgaccaagtgctgattacgacgaacggcgaa
ggcgctaagtttgtcaaggtgcgtgttagatctacgcgtgtaccgcaggtgggagataag
ttcgcctcgcgacatggtcagaagggtacaattggtatcacctaccgtcaggaagatctg
ccttttacgtgcgaaggtataactcccgatatcattatcaacccccatgccattcctagt
cgtatgactattggccatttggttgaatgtttgctttccaaggtcgccactctgtctggt
caggagggtgacgcaacgccattcactgatcttacagtcaagggtgtcagtgatattcta
ttttcgctcggcttccagtctcgcggtctcgaggtcatgtataatggacacacgggtcgc
aagctccaggcacaggtgtaccttggtccaacgtactaccagcgcttgaagcacatggtg
gatgacaaaatccacagtcgtgctcgtggtccagtacaaattctcactcgccagccggtc
gagggtcgttcgcgtgacggtggtttgcgctttggtgaaatggagcgtgactgtatgatt
tctcacggcatggccaacttcttaaaagaacgcatgtatgacgccagtgacgcctaccgg
ttgcacatctgcgacctttgcggtttgacggcagtggcgaacctgcgaaaaggcacgttc
gagtgccgtgcgtgccgcaaccgctcggccatatcgcaaattcacatcccgtacgcggcc
aagctcttgttccaggagctcatgagtatgggcatcgctacgaggttgtactaa
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