Malassezia restricta: MRET_2680
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Entry
MRET_2680 CDS
T06113
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
mrt
Malassezia restricta
Pathway
mrt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MRET_2680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_2680
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
MRET_2680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_Syf1_CNRKL1_C
ARM_TT21_N
Motif
Other DBs
NCBI-GeneID:
38739446
NCBI-ProteinID:
XP_027484912
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Position
IV:535878..538184
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AA seq
768 aa
AA seq
DB search
MQASSAERQAYEHAVSQEPRIPGPWMELMAYVRQSGDLNDICDVYDRFLEHFPQASAQWI
EYVNLALSQSNFDQADAIFVRCLRSTLSMDLWKVYLAYVRRVHPLPPFTGEENSPRDQTR
RILEASYEYALKHIGWDRESGPIWQDYIQLVREREARGAWQEGQKMDQLRRIYQRAVSTP
MNHIEAIWKEYDAYENSLNKLTAKKFLAEHSPAYMQARAVLGEMKPLTDGLVRPSLPTPP
SWIVPNSRAAPQKEHASYEAWHAYLAWEQTNPLALQDHGAWQHRVLCAYKKATMYIRFDA
VVWYMAAHFCRTIQRENDMLVWLRDGIDACPWSILLRFTYADISTRLGRFSDATAALDDL
VDYAQAQVDKRLSALADAKARIDEHMATERKQRLDKRAQLDSVPDDDDGDKAELADIERR
VQEERDQQYQQLEKEAEATISVWRDAVSQVWIKYMQFVRRSEGIRAARQIFSRARKSKHC
SWQVYEASAMLEYHCAKEALVATKVFELALKTFGPDEHLVVRYLDFLLSVNDDANARAVL
ERTVSSLPPERARIVWDRWATYEYNYGDASGIARLETRMSDLYPGRPAVQSAAHKLQYRT
LDWVRAHELGMEVSTTKPKESKRKAESRSSAPEVSAPEPTKTSDSKADAPSSGGRTMEDI
RRSLATSAEPVKRTRGKSEEKSTKKSKSTVHDAPRKGARDTPPPSSSSLAPPPVPTIPDA
ILYFMSLLPHAMTYDGPPIPPEAIFECLARSRLPLLPDARKAVAKRRP
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatctagcgccgagcggcaggcgtatgagcacgcagtatcgcaagagccacgc
attccagggccatggatggaacttatggcctatgtgcgacagagcggtgatctgaacgac
atatgcgatgtgtatgaccgcttcttggagcattttcctcaggcgagtgcacagtggatc
gagtatgtgaacttggccttgtcacagtcgaattttgaccaggcggacgcaatttttgtt
cgatgcctgcgctcgactctgtctatggacttatggaaagtataccttgcctacgtccgt
cgtgtccatcctcttccgccgttcacgggagaggaaaatagcccgcgtgaccaaactcgg
cgcattctggaagcatcgtacgagtatgcgttgaaacatattggatgggaccgtgagagt
ggacccatttggcaggactacattcaactggttcgcgagcgcgaagcgcgaggggcatgg
caagagggacaaaagatggatcagctacgaaggatataccagcgtgctgtttctacgcca
atgaatcacatcgaggcgatctggaaagaatacgatgcctatgaaaattctctcaacaaa
cttacggcgaaaaagttcttggcagagcactctccggcgtacatgcaggcgcgtgcagtg
ctgggagaaatgaagccgctcacggatgggcttgtgcgcccatcgctcccgacgccgccc
agttggattgtgcctaactcgcgtgctgcaccacagaaggagcatgcttcctatgaggca
tggcatgcgtatctcgcgtgggagcagacgaatccgctagctctgcaagatcatggagcg
tggcagcaccgtgtcttgtgtgcgtacaaaaaagccaccatgtacatacgcttcgatgct
gtggtctggtatatggctgcgcatttctgccggacgatccagcgggagaatgatatgctt
gtatggcttcgagatgggattgatgcgtgtccatggagtattctgttgcgttttacgtac
gctgatatcagcaccagattgggtcggttctcagatgccactgctgctctggatgaccta
gtggactacgcgcaggctcaagtggataagcgtcttagcgcgctggcagacgccaaggcc
cgcattgatgagcacatggccacggagcggaagcagcgccttgacaagcgagcgcagctc
gactctgtgcctgacgatgatgatggcgacaaggctgagcttgcagatattgaacgccgt
gtgcaggaggagcgagaccaacaataccagcagcttgaaaaggaggcggaggccactatc
tcggtctggcgcgatgctgtgagccaggtatggatcaagtatatgcagtttgtacgtcga
tcagagggtatacgtgccgcgcgccaaattttttcgcgtgcgcgcaagtcgaaacactgt
tcgtggcaagtgtacgaggctagtgccatgctcgagtatcactgtgcgaaagaggcgctc
gtcgcgaccaaggtatttgagctggcgctcaagacttttggtccggatgagcacctcgta
gtgcggtacctggactttttgttgtctgtcaatgacgatgccaatgctcgtgcagtcttg
gagcggacggtgagcagtctgccgcctgagcgagcgcggattgtgtgggatcgctgggca
acgtacgaatacaactatggtgatgctagtggtatagcgcgtctcgagactcgcatgtct
gacctgtaccctggtcgcccagcggtccagagcgcggctcacaagttgcagtatcgcacc
ctggactgggtccgtgcacacgagctgggtatggaagtatcgacgacgaagcccaaggag
tcaaaacgcaaggcagaatcgcgctcatctgcgcccgaagtgtccgcgcccgagccaacc
aaaacgagcgacagcaaagcagatgccccgagtagtggtggtcggaccatggaggacatt
cgtcgctccctcgcaacctctgccgagcccgtcaagcgtacgcgtggcaagtcggaagaa
aagtcgacgaaaaagtcaaagagtactgttcatgatgcacctcgcaaaggcgctcgagac
acgccgcctccgtcgtcttcgtcgctcgcacctccgcccgtgcccacgataccagatgcg
attttgtactttatgagtttgctaccgcatgctatgacgtacgatggacctcctatccct
cccgaggctatattcgaatgcttggcacgcagcaggctcccactgctacccgacgcccga
aaggccgtcgcgaagcgccgtccatag
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