Malassezia restricta: MRET_2794
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Entry
MRET_2794 CDS
T06113
Name
(RefSeq) ATP-dependent RNA helicase
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
mrt03015
mRNA surveillance pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2794
09122 Translation
03013 Nucleocytoplasmic transport
MRET_2794
03015 mRNA surveillance pathway
MRET_2794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_2794
03041 Spliceosome [BR:
mrt03041
]
MRET_2794
03009 Ribosome biogenesis [BR:
mrt03009
]
MRET_2794
03012 Translation factors [BR:
mrt03012
]
MRET_2794
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MRET_2794
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MRET_2794
mRNA cycle factors
Stress granule specific factors
MRET_2794
Spliceosome [BR:
mrt03041
]
Complex C
Other components
EJC/TREX
MRET_2794
Ribosome biogenesis [BR:
mrt03009
]
Eukaryotic type
90S particles
Helicases
MRET_2794
Translation factors [BR:
mrt03012
]
Eukaryotic type
Initiation factors
eIF-4
MRET_2794
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Gp6_2nd
Utp25_C
Motif
Other DBs
NCBI-GeneID:
38739560
NCBI-ProteinID:
XP_027484835
LinkDB
All DBs
Position
IV:complement(join(719128..720194,720224..720272,720304..720366,720391..720396))
Genome browser
AA seq
394 aa
AA seq
DB search
MTDIHADQIVFESSEEVTIAPTFDALGLKENLLRGIYAYNFEKPSAIQQRAILPILRGRD
VIAQAQSGTGKTATFSISMLQTIDVSLRETQALVLSPTRELATQIQSVVLALGDYMNVQC
HACIGGTSIGEDIRKLEYGQHIVSGTPGRVFDMIRRRHLRTKNIKMLIMDESDELLNMGF
KDQIYDIYRYLPPATQVVLVSATLPHDVLEITTKFMTDPVRILVKRDELTLEGIKQFFVA
VEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDRMRENNFQVSSMHGEMQQRERD
AIMSEFRQGGSRVLITTDVWARGIDVQNVSLVINYDLPTNRENYIHRIGRSGRFGRKGVA
INFVTTEDVKTLRDIEQYYSTQIDEMPMKIDDLM
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatccacgcagatcagattgtattcgagagtagcgaagaagtcacgatagcg
ccaacctttgatgcactcggactgaaggaaaacttgctgcgcggcatttatgcatacaac
tttgaaaagccatcagccattcagcaacgcgccattttgcccatcttgcgcggccgcgac
gtcattgcacaggcgcagtctggcacaggcaagacggccaccttctccatttctatgctt
cagacaatcgacgtttcacttcgcgagacgcaggcgcttgtattgagtcccacgcgtgag
ttggccacacagatccagagtgttgtgcttgcactcggcgactatatgaacgtgcaatgc
cacgcgtgcattggcggcacatctattggcgaggatattcgcaagcttgagtatggccaa
cacattgtttctggcacgcctgggcgcgtttttgatatgattcggagacggcatctccgt
acaaaaaatatcaagatgctcattatggacgaaagtgacgagctgctgaacatgggcttc
aaggaccagatctatgacatatatcgctacttgccccctgctacccaggttgtacttgtc
tctgccacactgcctcacgatgtgcttgagatcactaccaaattcatgacggatcctgtg
cgcatcctcgtgaagcgtgatgagctcacgctcgaaggtatcaagcagttctttgtggcc
gtcgagaaggaagactggaaatttgacacactctgcgacctgtacgacacactgacgatc
acacaagcggtcattttctgcaatacacggagaaaagtcgactggctcacagaccgcatg
cgcgagaacaatttccaggttagcagcatgcacggagaaatgcaacagcgagagcgcgac
gctatcatgagcgaattccgtcagggcggcagtcgcgtgctgattacgacggacgtgtgg
gcccgaggcattgacgtccaaaacgtgtcgctggttatcaactacgacttgcctacgaac
cgcgagaactacatccatcgtatcggtcgttctggccgcttcggcaggaaaggcgtggcg
atcaactttgtcaccacggaggacgtcaaaactttgcgtgatattgaacagtattacagc
acgcaaatcgacgaaatgcccatgaaaatcgacgatctaatgtga
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