Malassezia restricta: MRET_2941
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Entry
MRET_2941 CDS
T06113
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_2941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_2941
03009 Ribosome biogenesis [BR:
mrt03009
]
MRET_2941
Enzymes [BR:
mrt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MRET_2941
Spliceosome [BR:
mrt03041
]
Complex A
U2 snRNP components
U2 related factors
MRET_2941
Complex B
MRET_2941
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
MRET_2941
Ribosome biogenesis [BR:
mrt03009
]
Eukaryotic type
90S particles
Helicases
MRET_2941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
ABC_tran
T2SSE
PhoH
nSTAND3
ATPase
AAA_29
Motif
Other DBs
NCBI-GeneID:
38739707
NCBI-ProteinID:
XP_027485588
LinkDB
All DBs
Position
V:175866..178175
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AA seq
769 aa
AA seq
DB search
MSTSVPPPPSTRSSDDENPYLQHQKKKKKKDMKKDTSEDGSPSDPLQGVVRRKVTGAQAR
RILDSETNVFVSDGPRNYSEKYQKILKDRKELPVYAQMDEFYEKFNANQITVVIGETGSG
KTTQIPQFVALSDLPQKNRVRAADGVEVPRMIACTQPRRVAAMSVAKRVSEEMDLKFGKE
VGYTIRFEDMTERGSTFLKYMTDGMLLREAMNDPNLERYSTVILDEAHERTLATDILMGL
LKDVAKRRPDLKIIVMSATLDALKFQKYFNNAPLLKVPGRTFPVEVFYTQEPEKDYVEAA
IRTVLMIHQAEDPGDVLVFLTGEDEIEDACRKIRTEGEKLLEEEPDLCGPLKVVPLYSSL
PPSQQQRIFDPAPEPSRPNGPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKVYNPRI
RVESLLVSPISKASAQQRAGRAGRTRPGKCYRLYTERDWASELIEQSYPEILRSNLANTV
LELKKLGIDNLVTFDYMDPPAPETVMRALELLNYLGAFDDHGNLTPLGEVMAEFPLDPQL
AKMLIVSPEFKCSNEILSVAAMLSVPNVFVRPSQASQRQAADAARAEFAHPDGDHLTLLN
VYHAYKTYCQDMKTGSDWCWENYLSHRALIQADNVRQQLQRTMERFDLSLVSLPFEDKRY
YSNIRQAIACGFFMQVAHKSAGGGGRGAYTTIKDNQIVTPHPSTTLDHMPEFVVYHEFVL
TSRNFIRTVTEVRPEWLLEFAPAYYDPRTFEGELKRIFTALQNKGKRKS
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgagcgtgccaccgccgccgtctactcgttcaagtgacgacgaaaacccatac
ctccagcaccagaaaaagaagaaaaagaaggatatgaagaaggatacatcagaagatggt
tctccatccgatccgctgcagggtgtcgtgcgtcggaaggtgacaggtgctcaggcgcgc
cggatcctggatagcgagacaaatgtgtttgtatctgacggaccgcgtaactactcagaa
aagtaccaaaaaattctcaaagaccgcaaggagctgcccgtatatgctcaaatggacgaa
ttctacgaaaagttcaacgctaatcaaattaccgtcgtaattggtgagactggtagcggt
aagactactcagatcccacaatttgtcgccctttcagacttacctcagaagaacagggtg
cgtgcggctgatggcgtcgaggtgccgcgcatgattgcgtgtacgcagccacgtcgtgtg
gcggcgatgagtgtcgccaagcgtgtatcggaagaaatggacctcaagtttggtaaagaa
gtgggctacacgatccgatttgaagatatgacagagcgtggatctacgttcctgaagtat
atgacggacggcatgctcttgcgggaagccatgaacgatccgaaccttgagcgttacagc
accgtgattcttgacgaggcacacgaacgcacactagcgacagatatcctcatgggtttg
ctgaaggatgtagccaaacgtcgcccagatctgaaaattattgtcatgagtgccacgctc
gatgcgctcaagtttcaaaagtacttcaacaatgctcctcttctgaaggtgccagggcgt
acattccctgtggaagtgttttacacacaagaacccgagaaagattacgttgaagcggcc
attcgtactgtgctaatgatccaccaggcagaagatcccggtgacgtgctcgtattcctc
acgggcgaggacgaaatcgaagacgcttgccgtaagatccgcactgaaggcgaaaagctg
ctggaggaagagcccgacctctgtggtcccctcaaggttgtgccgctgtactcgtcgctt
ccaccatctcagcagcagcgcatctttgacccagctccggaaccgtctcgtccaaatgga
ccacctggccgcaaggttgttgtaagcaccaatatcgccgaaacgtcgcttacaattgac
ggtattgtgtacgtggttgatcctggatttagtaagcaaaaggtgtacaacccacgcata
cgtgtggaatcgctgcttgtcagccctatttccaaggcatcagcccagcagcgggcagga
cgcgcaggccgtacacgtccaggtaagtgctatcgattgtatacggagcgcgactgggcg
agtgagttgatcgagcagtcgtatcctgagatcctgcgcagtaacttggccaacaccgtg
ctggaactcaagaagttgggcatcgataaccttgtcacgttcgactatatggacccgcca
gcaccagagaccgtcatgcgtgcactcgaactgctcaactatctcggcgcatttgacgac
catggtaacctcaccccgttaggcgaggtgatggccgagttccctctggatccacagctg
gccaagatgctgatcgtctctcccgaattcaagtgctcgaacgagatcctgagtgtagcg
gccatgctcagtgtgccgaacgtgtttgtgcgtccaagtcaggcctcacagcgccaggca
gctgatgcggcgcgtgccgagtttgcccatcccgacggcgatcatctgacgctgctgaac
gtgtaccacgcctacaagacctactgccaagacatgaaaacaggctcagattggtgctgg
gagaactacctttcgcatcgtgcgctaatccaagcagacaacgtgcggcagcagctccag
cgcacaatggagcgttttgacttgtcgcttgtgtcgttgccgtttgaagacaagcgctac
tactcaaatatccgacaggctatcgcgtgcggctttttcatgcaggtcgcgcacaagtcg
gcgggtggcggtggccgaggtgcttacacaactatcaaggacaaccaaattgtaacgccg
catccctcgacgacactcgaccacatgccagagtttgtcgtgtaccatgagtttgtgctg
acgtcgcgcaacttcatccgtactgtcactgaggtgcgtcctgagtggctgcttgagttt
gcacctgcctactatgatcccagaacattcgagggtgaactcaaacgcatctttactgcc
ctccaaaacaaggggaagaggaagtcgtag
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