Malassezia restricta: MRET_2990
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Entry
MRET_2990 CDS
T06113
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrt03016
]
MRET_2990
Enzymes [BR:
mrt01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MRET_2990
Transfer RNA biogenesis [BR:
mrt03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
MRET_2990
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSEN34_N
tRNA_int_endo
ORC3_ins
BLTP1_M
Motif
Other DBs
NCBI-GeneID:
38739756
NCBI-ProteinID:
XP_027485299
LinkDB
All DBs
Position
V:complement(join(259897..260822,260848..260929))
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AA seq
335 aa
AA seq
DB search
MERLRERYPDRIPIHLCQGVPLLLEVADVECARTEHHICGLLTGTLPLIPQQNVFLGLPL
RLLAEEVVYLLRKGVAVLIDETRAYMPPTADERETFLEQEQQQIQAQKERTLQHQDEQRR
VIEAKLQTEEAAALERRRARQASKDSSSHDGVSAQDALKRMPYVHYTQGESASIPGYVPC
TQAMLSDAPAGAQVNAYTTLGEAMQAGVWTYPRTLEQRARCAVFEDLHEQGYFLSTGLRF
GGDFVVYPGDPLRYHSHYTATILAAPEQAVPAFHIIASGRLGTAVKKSHLLCQSNTFVRD
DTQAEDRRRRGDDDTLQKPWGQVQYWSLAWAGFGT
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcttcgtgagcggtatccggatcggatccccatccatctgtgtcagggggtg
cccttgctgctcgaggtggcagacgtcgaatgtgcacgtacagagcaccatatttgcggt
ctgctcacaggcacgctgccgcttattcctcagcagaatgtgtttttgggcctgccgctg
cgtcttcttgccgaagaggtcgtgtatctcctacgcaaaggtgtggccgtcttaatagat
gaaacgcgtgcttatatgccgccgacggctgatgagcgtgagacgtttctggagcaggaa
cagcagcagatccaggcgcaaaaagagcgcaccctgcagcaccaagatgagcagcgcagg
gtcattgaggccaagctgcagacagaggaggcagcagcattagagcgccgccgtgcgcga
caggcatcgaaggactcctcgtctcacgacggagtgtcagcgcaggacgcgttgaagcgc
atgccctatgtccattatacccaaggtgaatctgcgtcgatcccaggctatgtgccatgt
acacaggctatgttgagtgatgcgccagcaggtgcgcaggtgaatgcgtatacgaccttg
ggagaggcgatgcaagctggtgtatggacatatccccgtacgctggaacagcgtgcacgc
tgcgccgtgttcgaagatttgcatgagcagggctactttctcagtacaggactccggttc
ggtggtgactttgttgtgtatcccggtgatccattgcgatatcactcccattatacggcg
acgatcctcgcggcgcccgagcaagctgtgcctgccttccacatcattgcttcagggcgt
ctcggcacagccgtcaagaagtcgcatcttttgtgccagtccaacacgtttgtacgcgat
gacactcaggcagaagaccgtcgtcgccgcggcgacgacgacacactccaaaagccgtgg
ggccaagtccagtactggagcttggcctgggccggctttggtacatag
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