Malassezia restricta: MRET_3087
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Entry
MRET_3087 CDS
T06113
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_3087
03036 Chromosome and associated proteins [BR:
mrt03036
]
MRET_3087
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MRET_3087
Chromosome and associated proteins [BR:
mrt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
MRET_3087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Spt6_S1
Tex_central_region
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
38739853
NCBI-ProteinID:
XP_027485764
LinkDB
All DBs
Position
V:428835..433328
Genome browser
AA seq
1497 aa
AA seq
DB search
MAEEARERTPADERVAPHSDEEGEDLMKESGNIVGMDSSDDEDDDDDEEEQRRVAEGFIV
DENEEDEEEGGESTHKRKRRHRHRELDEELDEDDLALLSENTRPEGARHKRARPAGEEER
TNELAHIFDDEDDGAQQADYFDDGLDDFIEDDEEDAEMSGLNEEEREARRREKREDRRRA
RMSGARVDPRKAGMDLEAWDEVHDIFGNGEDYAWALEADDEHAEEAKARMDYKDIFEPAQ
IRERLLTEEDDRIRQVDVPERLQLLIPGQEGLALLERKLTDAELDDAAHWASTRISPRCT
AEFLEDYAPHARLRAEWFACVRQMLAYMLNDMLEVSFLTQHRLDELEYTPMDAVQKTTTT
LLVRQELLTLYTLGIKFKLLLARKDSLRQTFAELSAAAFAGPDVDMSEVHATVEELLAQA
STLEEVTDISEWLAMRFGERFREATVLAKGHEGHTLKRPTVLSEYEQRKSTPLAQLAQRL
GLSSSQLADNVASGVRQHVPEDESRLPLEVADEYAGLAPGAGNASTAMALARSILAHEIS
KEPALRREVRTLFRLSALLDVEPNERGMTRIDEAHPYYNFKFLRGKPVSAVLQNASQFLQ
MVHAEEERLVHVTLRLPTDTASKLEQRLQEQYVSDGVSALSQAWNEERRAVVEEVCASFL
LPLGRAWAREWLVEECRESLLRHCEQRLTQRVEGGPVQSAGMLSRQRDPNWDEHVSRVPR
VLAVSHGSGDPRTSQIVAVSLDEDGHLIERATFDSLRAPLVQDEEADDPRAGFVELIKRR
HPDVVVVNGFSARSQDLKMTVKSLVDAAFDERVREEGLEGLAAQHLRMDVVSVYDDVARL
YQHSARAADEFPELSVLARYCVGLARYAQSPVNEFAALGADVTAVQFDPAQRLLPADRLR
ASLERAIVMLVNDIGLDLQTALTNTYVQHMLPFIAGLGPRKAQALLNGIRTRLDGIVVNR
EVLVRRGILTFVVWNNAASFLRIDQDAAADAADEDAQPDVLDATRIHPEDYDFPRQMARD
ALNKHEEDLEGEHPSVACAEIMEDARPSEKLAALDLDNYAAMLWERRGLRKRLTLLTCKQ
ELIRPYDDWRPPQLLPTAEELFMMFTGETRRSLAEGYVVPVVVTRIEEGRDIEGLLRVRL
EAGMDGVIAGRDIMPGYNSRDVRLRRLFRSGQALNAVVVHLDIQRMRAELSLRAEAFEHV
NPAQGRTPVDAMYFDHERAQMAIDAAEERARRRHQNRIGRRVIDHPNFHNFNAIQAQNFL
ATQPRGSVVVRPSSRGMDHLAVTWKVDDGVYQHIDVLELDKENDYALGRILRVADMGSYA
DLDDLIVNHVRPMASMVEMMMNHEKYKGADEQALHTYLTNVSLANPTRSVYAFGLNKQHP
GYFDLAFKANSQAPIQTWPVKVLPGAFKLGQATQLADVAALTNAFKTQYMAQTSGGRGDR
TSAPHGGMTPGYYYGGRTPGRGGTTPGYYGGATPSYGTMPAYGHPPPPRGPPGASRW
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaggcacgcgagcgcacgccggccgatgagcgagtggccccgcatagtgat
gaagaaggggaggatctcatgaaggagtctggcaacatcgttggtatggatagcagcgat
gatgaagatgatgatgacgacgaagaagagcaacgtcgtgtggcagagggtttcatcgtg
gatgagaacgaggaggacgaagaagaaggtggagaaagcacacacaagcgcaaacggcgg
catcgtcatcgcgagctggacgaggagctagacgaagatgacctagctctgctctcagaa
aacacgcgacctgaaggcgcgcgtcacaagcgtgcacgcccagctggcgaagaggagcgc
accaacgagcttgcgcatatttttgacgatgaagatgatggagctcagcaagcggactac
tttgacgatggtctcgacgactttatcgaagacgacgaagaagacgctgagatgagcggc
ctcaatgaggaagagcgtgaggcgcggcgacgtgagaaacgggaggatcgccgaagggcc
cgcatgtccggggctcgtgtcgacccacgcaaagcgggtatggacctcgaagcctgggac
gaagtgcatgacatctttggaaacggagaagattatgcatgggccctggaagcagacgat
gagcatgcggaagaggcaaaggctcgcatggactacaaggatatttttgaacctgcacaa
atccgtgagcgtctgttgacagaggaagacgatcgtattcggcaggtggatgtgcctgag
cgcttgcagctactgattcctggtcaagagggactggctcttctggagcggaaactcacg
gatgcggagcttgatgatgccgcacattgggcttcaacacgtatttctccgcggtgtacg
gccgagttcttggaggattatgccccacatgcgcggttgcgtgctgaatggtttgcgtgt
gtgcgtcaaatgctcgcctatatgctcaacgatatgctcgaggtgtcatttctgacgcag
caccgccttgacgagctggagtacacgcccatggacgcggtgcaaaaaacgacaactacc
ctccttgtacgacaagagctcctaacgctgtatacgctcggcatcaagttcaagttgttg
ctggcgagaaaagattctctgcgtcagacattcgctgaattgtcagccgcggcattcgct
ggtcctgatgtggacatgtcggaagtgcatgcaaccgtggaagagctcctagcccaggca
agtacattggaagaagtcacagacatttccgaatggctcgcgatgcgctttggggagcga
ttccgcgaggcgacggtgttggccaagggccacgaaggtcacacactcaagcgacctacg
gtcttgagtgagtacgaacaacgtaagagcacgccacttgcccagctcgcccagcgtctt
ggtctttcgtcatctcagctagccgacaatgtggcgagtggcgtccggcagcatgtgcct
gaagacgaaagccgattgcctttagaagtggcagacgagtatgctggtctggcgcccggt
gcaggaaatgcgtcaacagctatggcactggcgcgctcgattcttgcgcacgaaattagt
aaggaacctgctctgcgacgcgaagtccgcacgcttttccgcctatcagcactgctagac
gttgagccaaatgagcgcggcatgacacgtattgatgaagcgcacccatactacaacttc
aagttcctgcgcggcaagcccgtaagtgccgtgctgcaaaatgcctcgcagttcctgcaa
atggtccacgccgaggaagaacgtctcgtgcacgtgacgcttcgtttgcccaccgacacg
gccagcaagttggagcagcgtctgcaggagcagtatgttagcgatggcgtgagcgctctc
tcgcaggcatggaatgaggagcgtcgtgccgtcgtcgaagaagtttgtgcatcgtttttg
cttcccttgggtcgtgcatgggcacgtgaatggcttgtggaagagtgtcgcgaatcgctg
ctacggcactgtgagcagcgcctgacacagcgtgtggagggtggccctgtacagtcggcg
ggcatgctgagtcgtcaaagagatcccaactgggatgagcacgtatcgcgcgtgccgcgt
gtgttggctgtatcacatggctcgggcgatccacgcacgagtcagattgtggccgtgtcg
ctagatgaggatggtcatcttattgagcgcgcaacctttgattcacttcgcgcgccactt
gtacaggatgaagaagcagacgacccgcgtgccgggtttgttgagcttatcaagcgccgg
catcctgatgtcgtcgtggtgaatgggtttagtgcgcggtcgcaggacctcaagatgacc
gtgaaaagcctggttgatgcagccttcgatgagcgtgtgcgtgaagaagggctcgagggt
ctggcagcacagcatctgcgtatggatgtggtcagtgtgtacgatgatgtcgcgcgtctg
taccaacacagcgcacgcgccgcggatgagttcccagaattgagtgtgttggctcgttac
tgtgtgggtctcgcacggtatgcgcagtcccctgtcaatgagtttgccgcacttggcgcg
gatgtaacggccgttcagtttgaccctgcacagcgcttactgcctgctgatcgtcttcgc
gcgtcccttgagcgggcgattgtgatgctcgtaaacgatatcggtctggacttgcaaacg
gcactgaccaacacgtatgtccagcacatgctgccctttatcgctggtcttggtccacgt
aaagcgcaggctcttttgaacggtatccggacgcgtctggatggtatcgttgtaaaccgt
gaggtgctcgtgcgccgcggtattttgacttttgtcgtatggaacaatgccgcttcgttc
ctgcgcattgatcaagatgccgcggccgatgcagccgatgaggacgcgcagcctgacgtg
cttgacgccacacgtatccaccctgaagactatgattttccgcgccaaatggctcgagat
gcgcttaacaaacacgaagaggacttggaaggtgagcatcccagcgttgcatgcgccgag
attatggaagatgcccgaccctcagaaaagctcgcagctcttgacttggacaactatgcc
gccatgttgtgggaacgccgtggtctgcgcaagcgtctgacgctcttgacctgcaagcag
gaattgatccggccgtatgatgactggcggccgccgcagctgctgccgacggccgaagag
ctatttatgatgttcacgggtgaaacacgccgttcgcttgccgagggctatgtcgtgcct
gtggtcgtaacgcgcatcgaagaaggccgtgacatcgaaggccttttgcgggtgcgtctc
gaggcgggtatggacggtgtcattgccggtcgggatatcatgccgggctacaattcacgc
gacgtgcgtctacggcgtctcttccgctctggtcaggccctaaacgctgtggtggtccat
cttgatatccaacgaatgcgggccgagctcagtttgcgtgctgaggcatttgagcacgtg
aaccccgcacaaggccgcacgcccgtggacgccatgtactttgatcatgagcgtgcgcag
atggcgattgatgcggccgaagagcgcgcacgtcgtcgtcaccaaaaccgcatcgggcgt
cgtgtcattgatcatcccaacttccacaacttcaatgcgattcaagcgcaaaacttcctg
gcaacgcagccacgtggctcggtggtggttcgtcccagctctcgaggtatggaccacctg
gctgtgacatggaaggtcgatgatggcgtataccagcacattgatgtgcttgagctcgat
aaggagaacgactatgccctgggtcgaatcttgcgtgtggcagatatgggctcctacgct
gatttggacgacctgatcgtgaatcatgtgcgcccgatggcctctatggtagagatgatg
atgaaccacgaaaagtacaaaggggctgacgagcaagcattgcacacgtatcttaccaat
gtgtcactcgcgaacccgactcgttctgtatatgcctttggcctgaacaaacagcaccca
ggctactttgacctggcatttaaggcaaacagccaggcgccgatccagacgtggcccgtg
aaggtgctgccaggcgctttcaagttgggtcaggccacgcagctggccgatgtggcggct
ctgaccaatgcattcaagacgcagtacatggctcagacgagcgggggccgtggggatcgg
acttcagcccctcatggcggtatgacgcctggctattactatggcggccgcacgccgggc
cgcggcggtacgacgcctggttactatggcggagccacccccagctacggtaccatgccg
gcctacggacatccgccgccgccacgtggaccgcctggtgcgtcacgctggtga
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