Malassezia restricta: MRET_3403
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Entry
MRET_3403 CDS
T06113
Name
(RefSeq) translation initiation factor 4A
KO
K03257
translation initiation factor 4A
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_3403
03012 Translation factors [BR:
mrt03012
]
MRET_3403
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrt04147
]
MRET_3403
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MRET_3403
mRNA cycle factors
Stress granule specific factors
MRET_3403
Translation factors [BR:
mrt03012
]
Eukaryotic type
Initiation factors
eIF-4
MRET_3403
Exosome [BR:
mrt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MRET_3403
Exosomal proteins of bladder cancer cells
MRET_3403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
CMS1
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
38740169
NCBI-ProteinID:
XP_027485800
LinkDB
All DBs
Position
VI:join(83192..83199,83237..83371,83415..84480)
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AA seq
402 aa
AA seq
DB search
MSMPEETPVATDMQITDGEIQSNWDDVCDNFDNMNLAPELLRGVFAYGFERPSAIQSRAI
VPVIKGHDVIAQAQSGTGKTATFSIAILQRIDPNLKAVQALVLAPTRELAQQIQNVVVAL
GDYMNIQCHACIGGTNVREDMARLGDGAQVVVGTPGRVYDMINRGAFRTDKLKMFCLDEA
DEMLSRGFKDQMYEVFQLLPQDTQVVLLSATMPEDVLAVTKKFMRDPVRILVKRDELTLE
GIKQFYIGVEKEEWKFETLTDLYETVTITQAVIFCNTRRKVDWLTEQLHSQEFTVSAMHG
DMDQQQREVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDMPANRENYIHRIGRGG
RFGRKGVAINFVTEDDVRMLRDIEQFYNTHIEEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcctgaagagacccctgtcgccaccgacatgcaaatcaccgatggtgagatc
cagtcgaactgggatgacgtgtgcgacaactttgacaatatgaacctcgctcctgagctt
ctccgtggtgtgttcgcttatggttttgagcgtccttcggccattcaatcgcgcgcgatt
gttcctgtgatcaagggccatgatgtgattgcccaggctcagtcgggtactggtaagacg
gctactttctcaatcgctatcttgcagcgtatcgacccaaaccttaaggctgttcaggct
cttgtactggcccccactcgtgaactggctcaacagatccagaatgtcgtggtggctctc
ggtgactacatgaacatccagtgccacgcctgcattggtggcactaacgtgcgtgaggac
atggctcgcctcggtgacggtgcccaggtggttgtcggtacgcctggtcgtgtgtacgat
atgattaatcgtggcgctttccgtacggacaagctcaagatgttctgtcttgatgaagcc
gacgaaatgctctctcgtggtttcaaggaccagatgtacgaggtgttccagctgttgcct
caggacactcaggtcgttctgctttctgccacaatgccagaggacgtgctggctgtgacg
aagaagttcatgcgtgatcccgttcgcatccttgtcaagcgtgatgagcttacgctggaa
ggtatcaagcagttctacatcggtgttgaaaaggaagaatggaagtttgaaacgctgacc
gacctctatgagactgttacgatcacgcaggctgtgatcttctgcaacactcgccgtaag
gtcgactggctgacagagcagctccactcgcaggagtttacggtgtcagccatgcacggt
gatatggaccaacaacaacgtgaagtgattatgcgcgagttccgttcgggctcgtcgcgt
gtgctcatcacgaccgatcttttggcgcgtggtattgatgttcagcaagtctcgcttgtt
atcaactatgatatgcctgctaaccgcgagaactacattcatcgtattggtcgtggcggt
cgtttcggccgtaagggtgtcgctatcaactttgtcacggaggatgatgtccgtatgttg
cgcgacatcgagcagttctacaacacccatatcgaggaaatgcccatgaacgtggctgac
ctcatctga
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