Malassezia restricta: MRET_3412
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Entry
MRET_3412 CDS
T06113
Name
(RefSeq) SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mrt
Malassezia restricta
Pathway
mrt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
MRET_3412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_3412
03036 Chromosome and associated proteins [BR:
mrt03036
]
MRET_3412
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
MRET_3412
Chromosome and associated proteins [BR:
mrt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
MRET_3412
PBAF complex
MRET_3412
GBAF(ncBAF) complex
MRET_3412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Myb_DNA-bind_7
GP88
Motif
Other DBs
NCBI-GeneID:
38740178
NCBI-ProteinID:
XP_027486181
LinkDB
All DBs
Position
VI:complement(98328..101384)
Genome browser
AA seq
1018 aa
AA seq
DB search
MSLNVNGYPDESLLSDANVFARLEPLVDPLTSALHEKSLNVPSKGTLLNGQQLCEFLYEL
DTFQEDVLGYRSARPANPGAQLPSSRHPLRLPAALLQTFASYTNFEPLSSDAPLFSIFLS
CFTFLAEHHESTWDLKDKEKRNMYVEMIARVRAELRSKNLIRPVRIAAASDVTQAEAAHF
QSLAGSLGFEWVEDASQATHVLRPSTAEPAAPSSSDGPPPESEYFRTLAHHDKKVLIHVW
YRPDSYDTWMPDKDFSEPEPAPAPRTSAWYIDGRWLRDSQLYNEIMNEEDYEAEEEAETS
SGVVGSGKDESLANSAPSSEQKEDARRSKKHSLPDTISDDTASKRIKILVGNRSVGAQAI
DLSGSQPIPGKKYESEPIVSGTLGNLPTMEEVTNTSSQSEHLPVRSANASDAVHDATHDE
VLQTARKYLAEQTQEVIIPSYSTWFDMSTINAIEKRSLPEFFNNKNRSKTPTVYKEYRDF
MINTYRLNPSEYLTFTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDPETRPASLGPPFT
GHFRVLIDTPRGLSPMHPGTRPDAPIKSETAATATSTVPMEGTSLELRKSIFQSTLKGSR
PVDFAEAESLAAQAAQELDAQQDKKPAYACDTCGADCTPSRYQSVRVKEFAVCPPCYLEG
RFPTSMYSGDFVLLDHSAYKQAGHAAGAGSVSGDDWTDEETLKLLEGLEMYEEDWSLVSL
HVGTRSREQCITKFIQLPIQDPYLDGATQKDLGALQYAPRDPTSGQAVPLLPFAQADNPV
MSVVALLASAVSPAVAAAAAQSALGTLTDKVRKTIQDAAGQGAPSSEQGETGKDASLETK
ETLDNSGAPTEEMDEDTAAARSSSNDEKQNTGETIPKNEVERAASIALGASACKAYVLAS
HEERECQRLVQQVIELQMKKMHLKMSQFEELENLLEGERRSIEAARKQLYSDRLAVQRQL
AAVNDLLRKASTAPQNVRPDELARASSSVNGVPQQGPVIRRAPGTNVPTDSNVARMDG
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgaacgttaacgggtatccggacgaaagtctcttgagtgatgcaaatgtgttt
gcgcgactcgaaccgttagttgatccgctcacatctgcgcttcatgaaaaatcattaaat
gtgccgagcaagggtactcttctgaatggacaacaattatgtgagtttttgtatgaactt
gatacattccaagaagacgtgcttggatatcggtccgctcgtcccgcgaatcctggcgca
cagttaccatcttcgcgccatcctttgcgtctccctgcagctcttttgcaaacgtttgcg
tcttacacaaactttgaaccattgtcgtcagacgcacctcttttttccatttttctatca
tgctttacatttttagccgagcaccatgaatctacttgggatctgaaagacaaagaaaag
cgcaatatgtatgtggaaatgatcgcgcgagttcgagccgaattgcgaagcaagaatctc
attcgtcccgttcgaattgcagctgcgagcgacgtgacacaggcagaagctgctcatttt
cagagtcttgctggtagtctgggatttgagtgggtcgaagacgcaagtcaagccacacat
gtgcttcgcccttcgaccgcagagcctgccgcaccctcatctagtgatggaccaccaccg
gagtcggaatatttccgtactttagcacaccatgataagaaggtgctgattcatgtatgg
tatcgtcctgactcgtacgatacatggatgcctgacaaggacttttccgagcctgagcct
gctcctgcgccgcgcacctccgcgtggtacattgatgggcgctggctgcgcgactctcaa
ttgtacaatgaaattatgaatgaagaagactacgaagcggaagaagaagcagagacttcg
tctggtgtagttggctcaggaaaggatgaatctcttgcaaattcggccccttcgtctgaa
caaaaagaggatgcacggcgttccaagaagcacagtttacctgacacgataagtgatgac
actgcatcaaagcgcataaaaatactggtgggcaatcgctctgtgggcgcacaagccatt
gacttatctggatcgcaacctattcctggtaaaaagtatgagagtgagcctattgtgtct
ggtacgctgggtaacttgccaactatggaagaggttacaaatacgtcgtcacaaagcgaa
catctccctgttcgctcggctaacgcatcggatgcggttcatgatgctacgcatgacgag
gtattgcagactgccagaaagtacttggccgaacagacacaagaggtaattatcccttca
tattcaacatggttcgatatgtctactatcaatgcaatcgaaaagcgctcgctgcccgag
tttttcaacaacaagaatcgaagtaagacacctactgtatacaaggagtaccgcgacttt
atgatcaatacataccgtctgaacccaagcgaatatctcactttcactgcgtgtcgtcgt
aaccttgctggtgatgtatgtgctatcatgcgggttcatgccttcttagagcaatggggt
ctaatcaactaccaaattgacccggagacgcgccctgcttcgctcggtccacccttcact
ggtcatttccgtgtactcattgatactccccgtggactgtcgccaatgcatcccgggact
cggcctgatgcacctatcaagtcagagactgctgctacagctacaagcaccgtgcccatg
gaaggcacatcgctagagttgcgaaaatctattttccaatcaacactgaagggctcgaga
ccggtcgactttgctgaagctgagtctcttgcagcacaagcagcccaagagcttgacgcg
caacaagacaaaaagcccgcgtatgcatgtgatacctgtggtgcggactgcacgccttcg
cggtaccagagcgtccgagtcaaggaatttgccgtatgcccgccttgttatttggaagga
cgttttcccacctccatgtactcaggggatttcgtgctcttggaccactctgcgtacaaa
caagctggtcatgctgcaggtgccggtagtgtcagcggagatgactggactgatgaagag
acactcaagttacttgagggcctggagatgtacgaagaagactggagtttagtgtctctg
catgtgggtacgcgttccagggagcaatgtatcaccaagttcatccaattgcctatccag
gatccctaccttgatggtgccacacagaaggatctgggggcgctgcaatatgcgcctcgt
gatcccacaagtgggcaagctgttcctctgcttccatttgcgcaggctgataaccctgtc
atgagcgttgtggccttgttggcgagtgccgtaagccccgctgtggcggctgctgccgcc
caaagtgcccttggaacattaacagacaaggtgcgcaaaactatacaagatgccgctgga
caaggcgcgccatcttctgaacaaggagagactggaaaggatgcatcgttggaaacgaaa
gagacacttgacaattcaggtgcaccgaccgaggaaatggatgaggacaccgcagcagct
agatcatcatccaacgatgagaaacagaatacaggtgagacgattcccaagaatgaagtt
gagcgtgctgcctctatcgctctaggtgcatctgcctgcaaggcgtatgtgctagccagc
cacgaggagcgggagtgtcagcgcctagtgcagcaagtgattgagcttcagatgaaaaag
atgcatctgaagatgagtcaattcgaagaactagaaaacttactggaaggagaacgccgt
tcaatcgaggccgccagaaagcaactttattctgatcgtttggcagtgcaacggcaattg
gctgccgtgaatgaccttcttcgcaaagcaagcaccgctccccagaatgtgcgacctgat
gagctggctcgtgctagcagttctgtgaacggtgtgcctcaacaaggccctgtgattcgt
cgagcacctggtacgaatgtgcctacggacagcaacgtcgccagaatggatggataa
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