Malassezia restricta: MRET_3441
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Entry
MRET_3441 CDS
T06113
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
mrt
Malassezia restricta
Pathway
mrt03020
RNA polymerase
mrt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MRET_3441
09124 Replication and repair
03420 Nucleotide excision repair
MRET_3441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrt03021
]
MRET_3441
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_3441
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_3441
Transcription machinery [BR:
mrt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
MRET_3441
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
MRET_3441
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
MRET_3441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
38740207
NCBI-ProteinID:
XP_027486064
LinkDB
All DBs
Position
VI:join(152056..152067,152095..152158,152183..152232,152258..152368,152394..152555,152581..152646,152674..152721)
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AA seq
170 aa
AA seq
DB search
MFFLKNLDHRIELHPSFFGPSMVEFLNRKLRDDVEGTCSGKCGYVIKVVSILDVGQGKIM
PGTGLAEFRSRYQAIVLKPFNGEVIDAKITNVNKMGFFAEVGPLSIFVSSHLLPIDYKFQ
PDANPPEFTSPTDNLVKGRRVRVRIVGTRVDANEIFAIGTMKEDYLGPFD
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctcaaaaatctcgatcaccgcatcgagctgcatccgtcgttctttggtccg
tccatggtggagtttctgaatcgcaagctccgagatgacgtggaagggacctgctccggc
aaatgcggctatgtcatcaaggtcgtctcgatcttggatgtcgggcaaggcaagatcatg
cccggcacgggtctcgccgagttccgcagcaggtaccaggccattgtgctcaaacccttc
aacggcgaagtgatcgacgccaaaatcacgaacgtcaacaagatgggattcttcgccgaa
gtcgggccgctcagcatatttgtctcatctcatctcctacctatcgactataaatttcag
cctgacgcgaatccacccgaattcacctcccccacagacaacctcgtaaaaggacgacgc
gtgcgtgtgcgcatcgtcggtacgcgtgtggacgccaacgaaattttcgccatcggcacc
atgaaggaagactacctgggcccctttgactaa
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