Malassezia restricta: MRET_3447
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Entry
MRET_3447 CDS
T06113
Name
(RefSeq) pre-mRNA-processing factor 40
KO
K12821
pre-mRNA-processing factor 40
Organism
mrt
Malassezia restricta
Pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_3447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mrt03041
]
MRET_3447
Spliceosome [BR:
mrt03041
]
Complex A
U1 snRNP components
U1 related factors
MRET_3447
Complex B
MRET_3447
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
38740213
NCBI-ProteinID:
XP_027486069
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Position
VI:join(162353..162394,162419..164170)
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AA seq
597 aa
AA seq
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MVAKGQGDGTVSAWVEYKNAQGRVYWYHPGERKSVWDKPNELKSARERAMDTTPWREYKS
GDRSYYVNKETKESTWKIPADLQAFLDTIPDEPAPATAARPSKSMSPALSPATPPRGATP
THEAVGTAALRQQTSSVTRHATPVYATQEEAEAAFQSLLQRKNVNASSTWEQTLREIITE
PLYKALRTLAERKAVFHRYVDELKAQQAARREQKSAELRPKMLRAVPDLKPYASYATFKK
KLGTHPLWSELEDEEQAVSIFEAIRQDFREKEAARQKARGEQRRAQFLALLQKIEIRPTT
RWKDVQPQVPVADMPLTEQLRVFEDHMARVEADEREQQQGHGHSRQDRKARDAFRSLLEE
RIKEGTLHARSTWASFFPMIREDERLLNMTRISSGSSAQDLFYDALDALEREFAGYMRSV
QTSMREHQTLAREAADWDAWKETVQESDMIRALPEHTLRALFDECVYQSERDTRDMRRRT
ERRLRHYADDLRYAFRHVEPPLDIHASFEEVLPRIRMLPEYMALERAGDDETTTTARAAW
DRYVRRQTEKLADAMYAPGRSRTDYTDLDDAGEERKRKEPPEFPDPRAVRRRTEYET
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccaaagggcagggggatggcaccgtgagtgcatgggtggaatacaaaaatgca
cagggtcgggtgtactggtaccatccaggtgaacgaaaaagtgtgtgggataagcctaac
gagctaaagagtgcgcgagaacgcgcgatggacacgacgccgtggcgtgaatacaagtct
ggagatcgcagttactatgtcaacaaagagacgaaggagtcgacatggaagatacccgct
gatctgcaggcttttctggatacgatacctgacgagccagcgcctgcgacggcggcgcgc
ccgtccaagagcatgtcgccggcactgagtccggccacgccaccgaggggagctacgccc
acgcatgaagccgtgggtaccgcagcactgcgtcagcagacatcctctgtgacacgccat
gctacgcctgtgtacgcgacgcaggaagaggctgaggccgctttccaatcgctcttgcag
cgtaaaaacgtgaatgcatcgtccacgtgggagcagacgcttcgtgagattatcacggaa
cccttgtacaaagcacttcggaccctggccgagaggaaagccgtatttcacaggtatgtg
gacgaactaaaagcacaacaagctgcgcgtcgcgaacaaaaaagcgcggaactgcgcccc
aaaatgctgcgtgctgtaccggatctgaagccatacgccagctacgctacctttaaaaag
aaactcggaacgcatcctctgtggtccgaactcgaagacgaagagcaggccgtgtccatc
tttgaggccatccgacaagactttcgcgaaaaagaagcggcacggcaaaaggcgcggggc
gagcagaggcgcgcccagtttcttgcgctgcttcaaaagatcgagatacgccccaccacg
cgttggaaagacgttcagccccaggttcctgtggctgacatgccactgacggagcaacta
cgcgtctttgaagaccacatggcacgcgtagaagctgatgagcgcgaacagcagcaaggt
catgggcattcgaggcaggaccgcaaggcccgtgatgctttccgctccctgctcgaggaa
cgaatcaaagagggcactctgcatgctcggtcgacgtgggcgtcttttttccccatgatt
cgcgaagacgagcggctgttgaatatgacgcgcatctcatcaggatccagtgcccaggac
ctcttttacgatgcgcttgatgcgctggaacgcgaatttgccggatacatgcgctcagtg
cagacatcgatgcgggagcaccaaacgctggcccgagaagccgcggattgggacgcatgg
aaagaaacagtccaggagagtgacatgattcgggctctgcccgagcacaccctccgtgcc
ctattcgacgagtgcgtgtaccagtcggaacgcgacacgcgtgacatgcgacgccgcacc
gaacgccgacttcggcactacgcggacgacttgcggtacgccttcaggcacgtggagcct
ccgttggatatccatgcctctttcgaagaagtactgcctcgcattcgcatgctgccggaa
tacatggcgctggagcgtgcaggcgatgacgaaacgaccacgacggcacgggctgcttgg
gaccgctacgtgcgtcggcaaacggagaagctagcggatgcgatgtatgcaccaggccgc
tcgcgcacggactatacggatttggacgacgcgggcgaagaacgcaagcgcaaagagccc
cctgagttccccgaccctcgagccgtgcgccggcgcaccgagtatgaaacgtag
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