Malassezia restricta: MRET_3503
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Entry
MRET_3503 CDS
T06113
Name
(RefSeq) RNA-binding protein
KO
K27407
RNA-binding protein VTS1
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_3503
04131 Membrane trafficking [BR:
mrt04131
]
MRET_3503
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
MRET_3503
Membrane trafficking [BR:
mrt04131
]
SNARE
SNARE associated proteins
Others
MRET_3503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
38740269
NCBI-ProteinID:
XP_027485849
LinkDB
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Position
VI:255172..257043
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AA seq
623 aa
AA seq
DB search
MRSSYSAGMRNSPSPSPDQQSQRPTSSMGNANGLRFSHGNKMGLPNENIMRMSQSSQESP
RVMNLGNGGHMTGLGRGSNLRPSSEMLPVGQHGTPETDVIDKWFEDLQNYEATLEEMAAA
SLDQNFKEELSAIEQWFRVLSEAERTAALYSLLQESTQVQIRFFITVLQQMARNDPVGAF
ISPNPSNQSLNDQLEAKMAQLGIKSPTAMKSPSTNTRAFQRQSTGFLSPNSASLYGSANP
DVSAALAAQRSKLKANRTSAPGILPMESMTSYHGNSGLENVQEKPRTNTGNAHERPHSSD
VSRSPRASGSIEDALSPISVGGSWASMVNTPIMSMLDNNNNSRSDDTNAKLEATAAQLAQ
LSHHMSATQAETPDSARMTRGSSAPSNTTRGFAGDQAAGHANLMNTPAKLGNSPPFNIPA
MSPNALAGLQSPSGGMSNPANLQMMNTMAAMGGLNNMNSAQLLALQQQILQQQQQLNMAG
FGAQGMRGAGRSSHRNFGGLQSPPMAPRNLAGSPQPSSHVSGAQAEEEVADISILNDVPA
WLRHLRLHKYTPNFEGSNWREMVMMDDRALEEKGVAALGARRKMLKTFEAVRQKYGIDPP
VNPQPASTASEGKASEMSSEPNA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcatcttattctgccggcatgcgcaattcaccatcgccttcaccagatcaacag
tctcagcgtccgaccagctcgatgggaaatgctaatggactgcgattctcacacggcaac
aagatgggcttgccaaatgaaaacatcatgcgaatgtcgcagtcctcccaggaatcaccg
cgtgtgatgaacttggggaatggcgggcatatgacaggtttaggccgaggcagcaacctg
cgcccaagttcggagatgcttcctgtcgggcaacatggtacacctgaaacggacgttatc
gacaaatggttcgaggaccttcaaaattacgaggctacattagaggaaatggcggcagca
tctcttgaccaaaattttaaggaagaattgagtgcgattgagcagtggttccgggtattg
agcgaagcagagcgtacagctgcgctgtacagtcttcttcaggagtcaacacaagtccaa
atccgcttttttattactgttttgcagcaaatggctcgaaacgaccctgtcggtgcattt
atttcgcccaatccttcaaaccaatctttgaacgaccagctggaagccaaaatggcacag
ctgggtattaaatctcccacagccatgaaatctccttccactaatacgcgagcatttcag
cgccaaagcaccggcttcctttcacccaattcggcgtcattgtatggctctgctaatccc
gatgtctccgccgcgctggccgcgcaaaggagcaaactaaaagcgaatcgaacgtcggct
cctggtatcttacctatggaatcgatgacgtcttaccatggcaactctggcttagaaaac
gtccaagaaaaacctcggaccaacacggggaacgcccacgagcgtccacactcatcggat
gtctcccgttctcctcgtgctagtggatctattgaagatgccctttcacccataagtgtg
ggtggcagttgggctagtatggtcaacacgcctatcatgtcaatgttggacaacaacaat
aactcccgctcagacgataccaacgctaaattagaggctacagcagctcagctggctcaa
ctcagtcaccacatgtctgcgacgcaagcagaaacacccgactctgctcgcatgactcgc
ggtagtagtgctccaagcaacaccactcgcggttttgccggtgatcaggctgccggtcat
gccaaccttatgaacacgccagccaaacttggcaacagccccccgttcaatattcctgca
atgagtcccaatgccctggccggtttgcaaagtccctcaggtggtatgtctaacccagcc
aatcttcaaatgatgaatacgatggccgctatgggtggtttgaataacatgaactcggca
cagcttttggcgcttcagcaacagattcttcagcagcagcagcaactgaatatggcaggc
ttcggagcacaaggcatgcgcggtgcgggtcgctcgagccatcgtaatttcggaggattg
caaagtccacccatggctccacgtaacttggctggatcacctcaaccgtcttcacatgtt
tcaggagctcaagccgaagaggaggtagcggatatctctattctcaacgatgtgcctgct
tggctccggcatttgcgcttgcacaagtatacgcctaactttgagggttctaactggcgt
gagatggtcatgatggatgatcgtgcgttagaagaaaagggtgtggcagcattgggtgca
cgtcgtaagatgctcaagacattcgaggctgttcgtcaaaagtatggaattgacccgccg
gtcaacccccagccggcgagtactgcctcagagggcaaggcttctgagatgtcctccgaa
ccaaatgcgtaa
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