KEGG   Malassezia restricta: MRET_3807
Entry
MRET_3807         CDS       T06113                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 13
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
mrt  Malassezia restricta
Pathway
mrt03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:mrt00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    MRET_3807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mrt03009]
    MRET_3807
Ribosome biogenesis [BR:mrt03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    MRET_3807
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Utp13 EIF3I WD40_Gbeta Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th WD_LRWD1 Beta-prop_WDR41 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_RSE1_2nd Beta-prop_VPS8 Beta-prop_RIG_1st Beta-prop_ACSF4 Beta-prop_LRRK2 WD40_like VID27
Other DBs
NCBI-GeneID: 38740573
NCBI-ProteinID: XP_027486425
LinkDB
Position
VII:complement(62978..65527)
AA seq 849 aa
MTTTGGSSRGRLRTSFAKSEALDPFYSGGAVAVTSDAAWIAATFGTDVHMVEARTSRILH
KIAGDGEDIQSLTLSNDDTYLVTASRSLALHFYVLPGMEHVRTISKAHEAPVALMAVDPT
SSLLATGSADGSVKIWDMRGGYCTHVFRGHGGVISALCWHVESPSKAGRRVQLFTGCVDG
KVRVWDLHGHKKAMHAKPSAVLNAHAGVVRGISLSSDGQTLVSGARDQTLVFWDARDGHW
HRREIQLAHERIEALHFLPDVPYFITAGSRGALRVWDTQGRVVSEQTVERVDEDDEDELR
GLVDAVLASNTIVTVSATQDLAFFVWDGQLVQTRQLVGYNDEIVDLALVQTHYLAVASNN
SQLRIYRLDTQDRDHDVALVDGHSDMVLSIDTNGEWLVSGSKDHTARIWARVHDGRHGWV
CLGVCEGHAESVGCVVFSKKEDAPFVITASQDRTVKLWDLSVLTNDSRNVKLSSLLTLKI
HDKDINSIDIAPNNALLVSGSQDRTAKVFRLHYVPPRKNAKPTASLELLSTCRGHKRGVW
SVQFSPAEQAFATASSDQTVRMWSLKDFTCVRVFEGHTGSVLRLRYTPSGTQIVSSGNDG
LIKIWNVRDEECAVTIDAHEDKIWTLVVRDETPTTPLQIVSGAADSTMAVWNDTTEVVEA
EQAAAAKDAVEREQAFTNLVLLQDYRSAIALAFQMNQPRRLLQLFAQVAASRPEEDAIAS
MERLFQDALGTADAQSGSITGLATVDDILRDLPRSQLAQLLVYVRDWNTSARTSPIAQLV
LHAIVRQWDAESILDAIEDARASLQVSAVALLEGLVPYTERHYARVDRMLVESAMLEYTL
QAMDTIIGE
NT seq 2550 nt   +upstreamnt  +downstreamnt
atgacgacgactggcggaagcagccggggacgccttcgtacgtcgtttgccaagagcgaa
gcgctcgacccattttattcgggcggcgctgtcgctgtgacgtctgatgcggcatggatc
gccgcgacgtttggaacggacgtacacatggtcgaggcacgtacctcgcgcattttgcac
aagatcgccggagatggcgaggatatacagagcctcacgctgagtaacgatgatacgtac
cttgtgacggcctcccgctccttagcgctgcacttctatgttctgcctggcatggagcat
gtgcgcacgatttccaaggcccacgaggcgcctgtagccctgatggccgtggatccgacc
tcgagtctgctggcgacagggagcgccgatggctctgtgaagatctgggacatgcggggc
ggatactgtacacacgtgttccggggccatggcggcgtgattagtgcgttgtgctggcat
gtcgagagcccttcgaaggcaggacgccgcgtgcagctcttcaccggctgcgtcgatggc
aaagtgcgcgtatgggacttgcatggccacaagaaggcgatgcatgccaagccatcggcc
gtgctcaatgcgcatgccggcgttgtgcgtggcattagtctctcgtcggatggacagaca
ctcgtgagtggtgctcgagaccagacacttgtgttttgggacgcacgcgatggacattgg
catcgccgcgagattcaattggcgcatgagcgcatcgaggcgctgcatttcctgccggat
gtaccgtacttcattacggctggctctcgaggcgcacttcgagtgtgggatacccaggga
cgggtggtgagtgagcaaacggtcgagcgagtcgatgaggacgacgaagatgagctgcgc
ggcctggtggatgcggtccttgcttcgaatacgatcgtgactgtctccgccacgcaggac
ctggcctttttcgtgtgggacggacagctggttcagacgcgccaattggtgggctacaat
gacgaaatcgtggacttggcgctcgtacagacacactatctcgctgtggcatcgaataac
agccagctgcgcatctacaggctcgatacccaggaccgtgaccacgacgtggcgcttgtg
gatggacattccgacatggtactgagcatcgacaccaatggtgaatggctcgtatccggc
tccaaggaccacacagcccgaatttgggcgcgtgtgcacgacggacgccatggatgggtc
tgtcttggtgtatgtgaagggcatgcagaaagcgtcggatgcgtcgtcttttcgaagaag
gaagatgcgccctttgtcatcacagccagtcaggaccggactgtcaagttgtgggatctc
tctgtactgaccaacgacagccggaacgtcaagctgtcgtccttactgaccctgaaaatc
cacgacaaggacatcaattctatcgatatcgcgcctaataatgcgcttcttgtgtcgggc
tcgcaggaccgcacagccaaagtattccgtctacattacgtgccgccacgcaagaatgcc
aagcctacagcctcccttgagctgctatctacatgtcgcggccacaagcgcggcgtatgg
tccgtccagttctctccagctgagcaggcctttgccacggcgtcgagtgatcagaccgtt
cgcatgtggagtctcaaggactttacctgtgtgcgggtctttgagggccatacgggcagt
gtgctgcggctgcgatacacgcccagcggtacacagattgtgtcgtcaggtaacgatggg
ctcatcaagatctggaatgtgcgcgacgaggagtgtgcggtgacgatcgatgcgcacgaa
gacaagatttggacgctggtcgtgcgggatgaaacgcccacgacgccgctccagattgtg
agtggtgccgcggacagcacaatggccgtctggaacgacaccaccgaggtcgtcgaggcc
gagcaggctgctgcagccaaggatgccgtcgagcgtgagcaggcctttacgaatctcgtg
ctgcttcaggactaccgcagtgcgatagcactggccttccaaatgaatcagccgcgccgg
ctactgcaactgtttgcccaggtagcagcatcgcgaccggaagaggatgcgatcgcatcg
atggagcgtctgttccaagatgcactaggcaccgcggacgcccaaagcggcagcatcacg
ggcctcgcgaccgtcgatgatatcttgcgcgacttgccgcggagtcagttggcgcagctc
ctcgtatatgtgcgcgactggaacacgtctgcacgcacatctccgatcgcacagctggtc
ctgcatgcgatcgtgcgacaatgggatgccgaatcgattctcgatgcgatagaagacgcg
cgtgcgtcgctccaggtatcggccgtcgccctgctggagggcctcgttccgtacacagag
cgccactatgcgcgtgtggaccgcatgctcgtcgaaagtgccatgctcgagtacacgttg
caggccatggatactatcataggcgaataa

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