Malassezia restricta: MRET_3836
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Entry
MRET_3836 CDS
T06113
Name
(RefSeq) tRNA pseudouridine13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mrt03016
]
MRET_3836
Enzymes [BR:
mrt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MRET_3836
Transfer RNA biogenesis [BR:
mrt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MRET_3836
Prokaryotic type
MRET_3836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
CCDC53
Motif
Other DBs
NCBI-GeneID:
38740602
NCBI-ProteinID:
XP_027486341
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Position
VII:108458..110353
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AA seq
631 aa
AA seq
DB search
MSSADKSEHPSKRQRTEPSGHTYESDVGLLAYVHPGWRPVHAIIKQRYADFIVHELAADG
RMVSITSLDPPPVWESKKPQGSWDDLRDFFGDRLPDVQAGCLQGPVDSCALTDKSHRTHI
HRLLRALTGDRLISETIQVPEGSAVRVQQNTSRRSSRDDPDSESAAAPPYIHFTLQKTNR
DSQEALQWLARFLKLDHRGRASSVNALSVAGTKDKRAVTVQRVALQRGRRTLREVWDRVN
HIGQPISSDPGQKQRRTVHDAVTTRAERGLRIAHLSYADAPLQFGMLRGNHFTITLRDVR
WTDTATPSDDIQRILGEHVRDLEAHGFINYFGMQRFGTGLVSTHQVGIAVLRKDFREALR
LVLEAGALHGDADEEDAPPAVLATRQAQAAVAEKQYEDAYRLMPKKGVAERAVLEKMKMP
GWSPNDALGPFQNIPRSLRLMYVHAYQSYLWNRLVSERVARFGALSPVVGDLVQHSDDSI
HVLDAETVSQHSMDDVVMPMPGADVHLPQDGWLEQLYKDMLQQDGLTPDSLSSSHQPEYR
LKGAYRRLIHKPRNLRCEFLTYADANAPLCATDEEALLGVAIPTQSEAPYLAMKLSFELP
PSSYATVMLREILRTDTSAHVHKELTKQSTA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgctgataagagcgaacatccatccaaacggcaacgtacagaaccaagtggg
catacatatgagtcagacgtcggactcttggcttacgtgcatccgggctggcgacccgtt
catgccatcataaagcagcggtatgccgactttattgtccatgagctagcggcagatggt
cgcatggtgagcatcaccagcctagatcctccaccggtctgggaatcgaagaagccacag
ggttcctgggatgacctgcgcgacttttttggcgaccgactgcctgatgtccaggctgga
tgtctgcagggccctgtcgactcctgtgccttgacagacaagtcgcatcgaacgcacatt
caccgcctcctccgtgccttgacgggcgatcgtctcatttctgagaccatccaggtgcct
gagggctctgctgtgcgtgtacagcagaacacgtcgcggcggtcctcccgcgacgaccct
gattcagagtctgctgcagcgccaccatacattcactttactttgcaaaagacgaaccgg
gatagccaagaggcactgcaatggctcgcacgcttccttaagctagatcaccgggggcgc
gcctcttctgtcaatgcgctcagtgtggctggcaccaaggacaagcgcgccgtgaccgtc
caacgagtggctctacagcggggacgtcggacgctgcgtgaagtgtgggacagagtcaat
catattgggcagccgatcagcagtgatccgggccaaaagcagcgccggaccgtgcacgat
gctgtcacgacgcgtgccgagcgtggtttgcgtattgcgcacctttcctacgcagatgcg
ccacttcagttcggcatgttacgcggcaatcactttaccataacgctgcgcgatgtccgc
tggactgatacagccacgcccagtgatgatattcaacgcatcctcggcgaacatgtccgc
gatctcgaggcgcatggattcatcaattactttggcatgcagcgtttcggcacgggtctt
gtatccacgcaccaagtgggcatcgctgtgctgcgcaaagacttccgagaggcactccgc
ctggtgctagaggccggtgcccttcacggtgatgcggacgaggaggatgcaccccccgct
gtgcttgcgacgcgacaggctcaagcagccgtggcggaaaaacagtatgaagatgcctac
cgcttgatgcccaagaaaggcgtggcggagcgcgctgtgctggaaaaaatgaagatgccc
ggctggtcgcccaacgatgcactgggtcctttccaaaacatacctcgctctctccgtctc
atgtacgtccatgcgtaccaatcctacctctggaacaggttggtgtccgaacgtgtggca
cgtttcggtgcattgtcccctgtcgtgggtgatttggtgcagcattcagacgactcgatc
cacgtcctcgatgcagagactgtctcgcagcattcgatggatgacgtcgtcatgcccatg
ccaggcgctgatgtgcatcttccgcaggacggatggctagagcaattgtacaaggacatg
cttcaacaagacggcctgacacccgactctctttcatcctcgcatcaaccagagtaccgc
ctcaaaggcgcgtaccgacgcctcattcacaagccgcgcaacttgcggtgcgaattcctt
acgtatgccgatgcgaatgcgccgctctgtgcaacagacgaagaggctcttttgggcgtt
gccatacccacgcagagcgaggcgccatacttggcgatgaagctttcctttgagcttccg
ccctcgtcctacgccactgttatgctgcgcgagatcttgcggaccgataccagcgcgcat
gttcacaaggaactcacgaaacagtccacggcttag
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