Malassezia restricta: MRET_3859
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Entry
MRET_3859 CDS
T06113
Name
(RefSeq) putative mago nashi protein, exon junction complex
KO
K12877
protein mago nashi
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
mrt03015
mRNA surveillance pathway
mrt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MRET_3859
09122 Translation
03013 Nucleocytoplasmic transport
MRET_3859
03015 mRNA surveillance pathway
MRET_3859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_3859
03041 Spliceosome [BR:
mrt03041
]
MRET_3859
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
MRET_3859
Spliceosome [BR:
mrt03041
]
Complex C
Other components
EJC/TREX
MRET_3859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
38740625
NCBI-ProteinID:
XP_027486354
LinkDB
All DBs
Position
VII:complement(join(141213..141269,141307..141484,141512..141575,141601..141716,141744..141769))
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AA seq
146 aa
AA seq
DB search
MSEFYVRYYTGHKGRHGHEFLEFEYNRGRLRYANNSNYRNDSLIRKEMWISPLMTDQLRS
IVESSEILKEDDTTWPKRNANGRQELEIRLGKEHISFETAKLGSLIEVQDSEDPEGLRVM
YYLVQDLKCLVFSLISMHFKIKPISV
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagttttacgtgcgatactatacggggcataaaggacgacatggtcacgagttt
cttgaatttgagtacaaccgcgggcgcttgcgatatgcgaacaatagcaactaccgcaac
gattcgctgattcgcaaagagatgtggattagtccacttatgacggatcagctgcgttcc
atagtggaaagcagtgaaattctcaaggaagatgacacgacatggccgaaaaggaatgcg
aacggacgacaagaactcgagatccgactgggtaaagaacacatctctttcgagactgcc
aagcttggatctcttatcgaggtgcaagacagcgaggaccccgaggggttgcgtgtgatg
tactacttggtacaagatctcaagtgtctggtgtttagtctcatctcgatgcactttaaa
atcaagcccatttccgtgtga
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