Malassezia restricta: MRET_3981
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Entry
MRET_3981 CDS
T06113
Name
(RefSeq) U3 small nucleolar RNA-associated protein 22
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
mrt
Malassezia restricta
Pathway
mrt03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
MRET_3981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mrt03009
]
MRET_3981
Ribosome biogenesis [BR:
mrt03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
MRET_3981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap
Nrap_D2
Nrap_D6
Nrap_D3
Motif
Other DBs
NCBI-GeneID:
38740747
NCBI-ProteinID:
XP_027486469
LinkDB
All DBs
Position
VII:complement(323739..327335)
Genome browser
AA seq
1198 aa
AA seq
DB search
MPGAHKFQRTERGAEPVEDMEMYSDEDLEGGFEDVEDAEDDVVDAEPDDVTERVPSTSSH
YAIPSNEEIHGLKETSDLYMNNVFKLQLDEMRKHMPPSATHKPAMDDFLRHVQQCLVAIE
AVEPQPLSAAIRALERRVGCRVHVPFAEPVPRGDPAYAIGFEAPRTLHLVGSWPLQTAVR
RPGDMDVDVEAVMPSTLFQEKDTLNARYFTKRAFYLAVLAAHLRQEKHDVSYAFVGGDRR
RACVVLRPKALSKLRAVVRIHLAHEPGLFPVARLAPDRNNLRGAAVGASEQDTHALPPTP
MYNTCIAADSLRLAHLVYLNATSEMCAGFREACQLLKIWAAQRGFGALLLHGDAKHVARR
TLAGTDDARFVLSMLLAHLLHGDPKGSWTRTSKLSAGMSSVQLFRGVLEFLARHSFSTPV
WMKAQPRFGLAASDHAPAAFAVCERVLVEPSGCVNLLAHWPASSVDMLQHEAMQSMHMLS
DGDDHFADLFLVPHDVPLQRFDEVATLRLVKTTTPAVPCMDAGHAALWAVHRTLQVSAQA
LGQRAWCVAICTPTSVIHPIDEPLDQPPVVELGVGLRAEHAWHQVEHGPPPESDDAPTFR
AFWGDVAELRRFRDGRVLESVVWPVASLAQRYALPRRILRHALTYHVCAKRIRFAGDALA
TGYTDIPGALASRAYAQDPGVHGFQLVQSAYDTLARELRAMDELPLSVIGVSPTSAALRH
MSVFAPGPIRLAELGHDVPDVASYLPVHDVLITLESSGQWPDDLAAIQAMKAALYERMAD
VLSRRIPGAYARVAYDDDMAKDREAIHDHVALQLVLPAGFAFSLRIHHDREQVLLHRLLS
DAHVRPRAQAALTRYDTRFVHAPAHHAALSALQDRHAALAPTVRLVRRWFGAQLLLGHVG
PETLDLLCAAVFLTNAHAVPATGLHGFVRVLTLLAHWDWREVPLLLPLENATRLAHQRKA
ALSDGGVSALPSERAPTFPAAQRADAEQHFRAMRARDPAYRHYTWVVATEHDTDAKAWMH
AAPSAMVADGVRQLARRAALALEHDALHAMPALFAPAYDAYDFVVHIRPSVHVRYAEALA
PEARHWLEPKRKKYANDEVLRPSVYGSELRPGFDPVGAFVRMLKTLYGDTFTLFYDEFGG
TAIGGLWNAAYTKPHAFKVWLAHSARPHAKDAVVLNKPAILAEIRRLGQGIVERIDTI
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcgcacacaagttccagcgcacggaacggggcgctgagcccgttgaggacatg
gagatgtactcggatgaggatctcgagggtggttttgaggatgtcgaggacgcggaggac
gacgttgtcgacgccgagccagatgacgtcaccgagcgcgtgccgtcgacgtcttcccac
tatgcgattccgtcgaacgaagagattcacggactcaaagaaacgagcgacttgtacatg
aacaatgtgtttaagctacagctggatgaaatgcgcaagcacatgccaccgtccgcgaca
cataagcctgcgatggatgactttttgcggcatgtgcagcagtgcctcgttgcgatcgag
gctgtagagccacagcctcttagtgcggccatacgagcgctggagcgacgcgtaggatgt
cgtgtgcatgtgccattcgccgagcccgtgccgcgcggcgatcctgcctatgccattggg
ttcgaggcgccccgtactctccatctcgtgggcagttggcccctccagacggctgtgcgg
cgtccgggcgatatggatgtggatgtcgaggctgtgatgccctcgacgctgtttcaggaa
aaggacacgctgaatgcgcgctactttacgaagcgtgccttttatctcgctgtgctggcc
gcgcaccttcggcaggaaaagcacgacgtttcctacgccttcgtgggtggcgatcggcgc
cgtgcgtgcgtggtgctgcgccccaaggccctttccaagctacgcgccgtcgtacgtatt
catcttgcgcacgagccgggcctctttcccgtggcgcgcctggcgccggatcgcaataat
ctgcgtggcgcggctgtcggtgcgtcagagcaagatacgcatgcgctgcccccgacaccg
atgtacaatacatgtatcgcagctgactcgctccgcctcgcgcatctcgtgtacctgaac
gccacgtcggagatgtgtgctgggttccgtgaggcctgtcagctgctcaagatttgggcg
gcacagcggggatttggtgcgcttctcttgcatggagatgcgaagcatgttgcacgccgc
acgctcgcaggcacggacgatgcacgctttgtgctgagcatgctccttgctcacttgctg
cacggtgacccgaaggggtcttggacccgcacgtccaagttgtcagctggcatgtcgagt
gtgcagctgtttcgcggtgtgctcgagtttctggcgcggcactcgttctctacaccggtg
tggatgaaggcgcagccgcgctttggcctggccgcgtctgatcatgcgcctgccgcgttt
gctgtatgtgagcgcgtccttgtcgagccgagtggctgtgtgaatttgctggcacactgg
cctgcgtcgtccgtggatatgctgcagcacgaggccatgcagtccatgcatatgctgagt
gacggcgacgatcattttgcggacctgtttcttgtgccgcacgatgtcccgctgcagcgc
tttgatgaggtggcgacgctgcgtctcgtcaagacgacgacaccggccgttccgtgcatg
gatgcgggccacgccgccctgtgggccgtgcatcggacattgcaggtatccgctcaggcc
ctgggccaacgagcgtggtgcgtcgcgatatgcacgcccacgagcgtgatccacccgatc
gacgagcccttggatcagccgccggtggtcgaattgggcgtgggtctgcgggccgagcat
gcatggcaccaggtcgagcacggccccccgccggagtcggacgacgcgccgacgttccgc
gcgttttggggcgacgtggcggagctgcgtcgattccgtgacgggcgtgtgctagagagt
gtcgtgtggcctgtggcctcgttggcgcagcgctatgcactgcctcggcgcatcctgcgt
catgcgctcacgtaccatgtgtgtgcgaagcggatccgctttgcgggcgatgcgctggcg
acggggtacacggacataccgggggcgctcgcttcgcgcgcctacgcacaggacccgggc
gtgcatggcttccagctcgtgcagtccgcctatgataccttggcgcgcgagctgcgcgcg
atggatgagctgccgctctcggtgatcggtgtctcgcccacgagtgcggcgctgcggcac
atgagtgtgtttgcgccgggccctatccgcctcgccgagctcggccatgatgtgccggac
gtcgcatcgtacctgcccgtgcacgacgtcctgatcacgctcgagagctcgggtcaatgg
cccgacgacctcgcggccattcaggccatgaaggcggcgctgtatgagcgcatggccgac
gtgctttcacgccgtatacccggcgcctatgcccgtgtcgcgtacgatgacgacatggcc
aaggaccgtgaggccatccacgatcatgtggcgctgcagctcgtgctgcccgccggcttt
gcgttcagcctccgcatccaccacgaccgtgaacaggtgctgctgcaccgcctgctcagc
gacgcgcatgtgcgtccacgcgcgcaagcggctctcacccgctatgacacacgattcgtg
catgcgcccgcgcaccacgcggctctctcggccctccaggaccggcatgcggcgctcgca
ccgaccgtgcgcctcgtccgccgctggtttggcgcccagctcctcttgggtcacgtggga
ccagaaacgctggatctcttgtgtgccgcggtctttttgacgaatgcgcatgcggtgcct
gcgacgggcctgcatggttttgtgcgtgtgctcacgctgctcgcgcactgggactggcgc
gaggtgccgctcctgctcccgctggaaaacgcgacgcggctcgcgcaccagcgcaaggca
gctctgtcggacggcggcgtgagtgcgctgccgagcgagcgcgcgccgaccttcccggct
gcacagcgagcggatgccgagcagcatttccgtgcgatgcgtgcgcgcgacccggcgtac
cggcactatacgtgggtcgtggcgacggaacacgataccgacgccaaggcgtggatgcat
gcggcgccctcggccatggtagccgatggcgtgcggcaactggcgcgtcgcgcggcgctg
gccctcgagcacgatgcgctgcatgcgatgcccgcgctgtttgcgcctgcgtatgacgcc
tacgacttcgtcgtgcacattcggcccagtgtgcacgttcggtacgccgaggctctggcg
cccgaggcacgacactggctcgagccgaagcgcaagaagtacgcgaacgacgaagtgctg
cgtccgtccgtgtacggcagcgagctgcgccccggcttcgatcccgtgggagcctttgtg
cgcatgctcaagacgctctatggcgatacctttacgctcttctacgacgagtttggcggc
acagcgatcggcggtctgtggaatgcggcgtataccaagccacacgccttcaaagtgtgg
ctcgcacactcggcgcggccgcatgcgaaggacgccgtggtgctgaacaagccagccatc
ctcgctgaaatcaggcggctcggccaaggcatcgtcgagcgcatcgataccatatag
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