Malassezia restricta: MRET_4142
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Entry
MRET_4142 CDS
T06113
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
mrt
Malassezia restricta
Pathway
mrt03030
DNA replication
mrt03410
Base excision repair
mrt03420
Nucleotide excision repair
mrt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MRET_4142
03410 Base excision repair
MRET_4142
03420 Nucleotide excision repair
MRET_4142
03430 Mismatch repair
MRET_4142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mrt03032
]
MRET_4142
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_4142
DNA replication proteins [BR:
mrt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
MRET_4142
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
MRET_4142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_14
AAA_16
nSTAND3
SAGA-Tad1
AAA_33
AAA_30
NTPase_1
AAA_22
Motif
Other DBs
NCBI-GeneID:
38740908
NCBI-ProteinID:
XP_027486602
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Position
VIII:153158..155278
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AA seq
706 aa
AA seq
DB search
MDKKRAGASDGGDAKRIKSEPVWRQMAQRRAAGPVAPGSKAIPEGKPHCLAGLTLVFTGE
LSSISRDDAVDLAKRYGAKVTTAPSSKTSYVILGEGAGAKKLEMIQKNKIKTLDEDGFLG
LIAERGTQKLDPAVTKKLEEEEKKVQAAAKALDTPNTTPGQLWTSKYAPRQLRDLVGNKA
QIEKLQAWLRDWPKSLKANFKKPGPNATNTFRGMLISGAPGIGKTTAVHLVCALEGYEVL
ELNASDTRSKKLLESELSDTIHNRSIGSWMRGQPTKGRLAIVLDEVDGMSGGDRGGVGAI
NALIRKSQVPIICICNDRRNPKMQPLYTTTFNMTFSKPTVQAIRSRMLSIAFREGLRVPA
EVMDQLILAAQGDLRLVTNMLSTWKLSQKTMSFDQGKAFGAMHQKPTMHTPFSLYSELMS
PQRFGPLNKQSLNDKLDYYFQDHSIVPLMVAENYIKSLPAPVQKESAAPLREWKHLHAIA
QASNSISDSDLIESLMRGAQQHWSLLPHHGIASTIRPCSLTYGGHSSFPAFPSFLGQNSK
RMRLQRQLVELQTHLRLRTTGSKDDVRQSYVSGLLGQVVDPLLDRGQEGIRDAMQAMDEY
YLMPQDRETLVELELTHGREDRLKKLPASAKSAWTRAYNAATHPVAFQPGATGAAPKARA
LASESIPDNEEAYVDDEPDDVDDPPKDDQRDALIRPTKPRKSKGAT
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaacgcgccggtgcctctgacggtggcgatgccaagcgcatcaagtctgag
cctgtatggaggcagatggcacagcgccgggctgcaggtcctgtagcgcctggcagcaag
gccatccccgagggcaagccacattgcctagcgggtctcacgctcgttttcactggtgag
ctatcaagtatatcgcgagacgatgccgtggatttggcaaagcggtacggtgcgaaggtt
acgacggctccttcgtctaagacgtcctatgtgatcctgggcgagggtgcaggcgcgaaa
aagctcgagatgattcaaaaaaacaaaatcaagacactcgatgaagacggctttttgggc
ctcattgccgagcgcggcacgcaaaagctcgatcccgcggtcacaaagaagctcgaagaa
gaggaaaaaaaggtacaggctgcggcaaaagcgctcgacaccccgaatacaacgcccggt
cagctctggacgtccaagtatgcgccgcgccaattgcgtgacttggtcggcaacaaggcg
cagatcgaaaagctgcaggcgtggctccgtgactggcccaagtctctcaaagcgaatttt
aagaagccaggtcctaatgccaccaatacgttccgaggtatgctcatctctggtgcacca
ggcatcggcaagactaccgccgtgcacttggtatgcgcgctcgaaggctacgaagtcctt
gagcttaatgcgagtgatactcgcagcaagaaactcttggaatctgagctgtctgatacc
atccataatcgctcgattggcagctggatgcggggtcaaccgacgaaggggcgacttgcg
attgtgctcgacgaggtagatggcatgtcgggtggtgatcgagggggcgtgggagccatc
aatgccctgattcgcaagagccaagtccccatcatttgcatctgcaacgaccgacgcaat
cccaagatgcagcctctgtacaccacgaccttcaacatgaccttttcaaagccgacggtc
caggcgattcgttcgcgcatgctttcgattgctttccgcgagggattgcgcgttcctgcc
gaagtcatggaccagctcatcctcgcagcgcaaggtgatctgcgtcttgttacgaatatg
ctctcgacatggaagctgtcccagaaaaccatgtccttcgatcagggcaaggcctttggt
gcgatgcaccagaagcccaccatgcatacgcccttctcgttgtacagcgagctcatgagt
cctcagcggttcggacccctcaacaagcaaagtctcaacgacaagcttgactactacttc
caggaccactcgattgtgccgctgatggttgccgaaaactatatcaagagcctgcctgcg
cctgttcagaaagaatcggcggcgccgctgcgtgagtggaagcatttacatgcgattgcc
caagcctctaactcgatctctgacagcgatttgatcgaatctcttatgcgcggagcgcag
cagcactggtcgctcttaccacaccacggcattgccagcacgatccgcccttgttcgttg
acgtatggtggacactcgtccttccccgctttcccctcattcttaggccaaaactcgaag
cgcatgcggctgcagcgccagctggtcgagctgcaaacgcacctgcgtcttcgcacgacg
ggatcgaaagacgacgtgcgtcagtcgtacgtctcgggcctcctgggccaggtggtcgac
cctctgctggaccgtggacaagaaggcatccgggacgcgatgcaggctatggatgaatac
tacctcatgccacaagatcgcgagacgctagttgaactcgaactcacacacggccgcgag
gaccgactcaaaaagctcccagcctcggccaagtctgcatggacccgcgcctacaatgca
gccacgcaccctgtcgcctttcagccgggcgccacgggtgccgcgccaaaagcgcgtgcg
ctggcatctgagagcatacctgacaatgaagaagcgtacgtggacgatgaaccagacgat
gtcgatgacccgcccaaggacgatcaacgcgatgcgctcatccgaccgaccaagccacgc
aagagcaaaggagctacatag
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