Malassezia restricta: MRET_4174
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Entry
MRET_4174 CDS
T06113
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
mrt
Malassezia restricta
Pathway
mrt03015
mRNA surveillance pathway
mrt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
MRET_4174
09123 Folding, sorting and degradation
03018 RNA degradation
MRET_4174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_4174
03041 Spliceosome [BR:
mrt03041
]
MRET_4174
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MRET_4174
mRNA cycle factors
Stress granule specific factors
MRET_4174
Spliceosome [BR:
mrt03041
]
Complex C
Other components
Complex C specific factors
MRET_4174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_5
RRM_occluded
RRM_3
Calcipressin
Motif
Other DBs
NCBI-GeneID:
38740940
NCBI-ProteinID:
XP_027486516
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All DBs
Position
VIII:209917..211851
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AA seq
644 aa
AA seq
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MSSEVAATQQPATSQAAPSEAAAAAPPAPAPSKPADVAADDKEKSAKEEKEKSKGSGQVN
TSLYVGELDQNVNEAILFEIFNMVGAVSSIRVCRDAVTRRSLGYAYVNFLNAEDSERALE
QLNYTPIRGRPCRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFLAFGKILSCKV
ASNEHGSLGYGFVHYESNDAAEEAIKHVNGMLLNGKKVYVGHHISKKDRQAKIEEARAQY
TNVYVKNLDPAVTQEEFEKLFEKYGKITSVALATDQEGKSRGFGFVNFAEHEQAAKAVAE
LNDTEFHGQKLFLGRAQKKAEREEELRRAYEAAKNEKLSKYQGVNLYIKNLPEEFDDERL
QEEFAPFGTTTSAKVMRTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVALAQ
RKDVRHQQLAAQMMQQNQLRMQQQQAAAAAAAQMYPGAPGMYYPQPPGAAPVVGLNQFPG
QVRPPYAPGMMQGMPPMAPGQAPYAPGQFPPPGGMFPQGYRPPRPPRGGAAPPPAGALPA
GVPAGAPRGGNAPAAPAQPEVLTAAALANASPEEQKQMLGEAIYPKIAASQPQLAGKLTG
MILELPVGELLHLLEDDEALASKVDEALTVLREYETREGTQAPN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgaagttgccgcgacgcagcagccagccacgagccaggctgctccatcggaa
gctgccgctgccgcgccccccgctccggccccgagcaagccggcagatgtggctgctgac
gacaaggagaagagcgccaaggaagagaaggaaaagtccaagggaagcggccaggtgaac
acctcgctgtacgttggtgagttggaccagaatgtgaacgaggcgatcctgtttgagatt
ttcaacatggtcggtgctgtgagcagcatccgtgtgtgccgtgatgccgtgactcgtcgc
tcgctgggctatgcctacgtgaactttttgaacgcggaggacagtgagcgtgctttggag
cagctcaactacacgccgatccgcggtcgtccttgccgcattatgtggtcgcagcgtgac
ccgggccagcgccgtgcgggccagggcaacatctttatcaaaaacctggatgaggcgatt
gacaacaaggcgctgcacgacaccttcctggcgtttggcaagatcctgtcgtgcaaggtg
gcgtcgaacgagcatggcagcctgggctacggtttcgtgcactacgagtcgaacgacgcc
gccgaggaggcgatcaagcacgtgaacggcatgcttctgaacggcaagaaggtgtacgtg
ggtcatcacatctcgaagaaggaccgtcaggccaagattgaggaggcgcgtgcgcagtac
acgaacgtgtacgtgaagaacctcgacccggcggtgacgcaggaggagtttgagaagctg
tttgaaaagtacggcaagattacgtcggtggcgttggccacggaccaggagggcaagagc
cgtggctttggctttgtcaactttgccgagcacgagcaggctgcgaaggctgtggcggag
ctcaacgacaccgagttccacggccagaagctgttcctcggccgcgcccagaagaaggcg
gagcgtgaggaggagctgcgtcgtgcgtacgaggcggccaagaacgagaagctctccaag
taccagggcgtgaacttgtacatcaagaacctgcccgaggaatttgacgatgagcgactg
caagaggagtttgcgccgttcggcacgacgacgtcggccaaggtgatgcgcacgcccacg
ggcgcctcgcgtggcttcggctttgtgtgctactcggcgcccgaggaggccaacaaggct
gtggccgagatgaacggcaagatgatcgagaaccgtccgctgtacgtcgcgctcgctcag
cgcaaggacgtgcgccaccagcagctggctgcgcagatgatgcagcagaaccagctgcgc
atgcagcagcagcaggccgccgctgccgctgctgcgcagatgtacccaggtgcgccgggc
atgtactacccgcagccgcctggcgcggcccccgtcgtgggcctgaaccagttccctgga
caggtgcgtccgccgtacgcgcccggcatgatgcagggcatgccgccgatggcaccgggc
caggcgccgtacgcgcccggccagttcccgccgcccggtggcatgttcccgcagggctac
cgcccgccgcgtcccccgcgtggtggcgctgcgccgccgcccgccggtgcgctgcccgct
ggtgtgcccgctggcgcgccgcgtggtggcaatgcgcccgctgcgcctgcgcagcccgag
gtgctgacggccgcggcgctggccaacgcgtcgccggaagagcagaagcagatgctgggt
gaggcgatctaccccaagattgccgcatcgcagccgcagctcgctggtaagctcacgggt
atgattctggagctgccggtcggcgagctgctgcacctgctcgaggacgacgaggcgctg
gcgagcaaggtggacgaggcccttaccgtgctgcgtgagtacgagacgcgcgagggtacg
caggccccgaactag
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