Malassezia restricta: MRET_4225
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Entry
MRET_4225 CDS
T06113
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
mrt
Malassezia restricta
Pathway
mrt03013
Nucleocytoplasmic transport
mrt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MRET_4225
03015 mRNA surveillance pathway
MRET_4225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrt03019
]
MRET_4225
Messenger RNA biogenesis [BR:
mrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
MRET_4225
mRNA cycle factors
P-body specific factors
MRET_4225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Ring_hydroxyl_B
COQ9_N
RXT2_N
NOA36
RRN3
Motif
Other DBs
NCBI-GeneID:
38740991
NCBI-ProteinID:
XP_027486530
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All DBs
Position
VIII:complement(303996..307037)
Genome browser
AA seq
1013 aa
AA seq
DB search
MDQPQLVAPSHGQVVDEAKTAAPSRDAADLAKSAEREKWRASLREANQHVWLHGPHGSGD
NLDASLKRNSAFIKRLKQTNLADAKDALVKEVQLLSLTKYLDELIPSIPEILWKATTLKD
RYAVIEILCALHARFGGSEFTEPLLKVMEQEIVPPPPKSQDASNEQAQKEAALVARQRSL
LRGVTEMVLVGLVGPMTLSEGVCAPGLNWLYEQLRKMLSQDRDLVYTSVAQAILRSYGSL
LLVPMETHEAGQPGVPMGKLAEDAVISEAQSLKFRKLFEAYYAMLARRAQREHEQLQEQE
QRNSDAYIRSGVVFDDRQSAFERRVSDVHTMIEAMHAMAASLQVELPELRESDKDPSAPR
FGVNLEATSTLAEMSAKMEQEYASGKSPWEDEEMRKFYKDLCPLDELLPASVLEAAAASS
DETDARVQQSLQHSLDRLPTMCNQGTVDDVAIELGFQLKSMSARRLSAALLHVPKHRWDM
LPYYARLIATLQPYRPGLAEAVVEHLNQKLRQQQSFRKPDRQLQSHLIIYLGELTKFGLV
PEHIVFHLYKVLLDDFSPTSIEMLALSIETCGRYLHRMPATAARMQHVLDLLRRKRLAHN
LSEQHTLLLDNAYYKCVPPDRPIVTYREPSAMEQFITHVFTHMLGHGSFDRTQALVKMLN
WSDESIRAHIFTLFTSPWLLTHDTLPLLARLLSRIQQCHEAFVCEVLDTLSEDIEADLLH
LDFAGHQRRLARVRYLGECHACFLVKPDAMLQQLYRLCVPQPQRKDAPNDYTRVRMACTL
LPYFGKAFQKPPYKQRLDHVCAVLQHYILSKDEPPVEVAYLLQDSFSHLGVSRDGRVNHK
RLAKRLREAQPYLVKLDLGKRMAGKRPAHRGDGDNDDDNDDDHDDEEDDDDDDDDPERQA
AQQAALDERAEADVEQELAMLMADTGGPSAAPSGMALEQTRSMLARAHVPRRRLEANDQH
MVFSLVSRKQTQDIHVPTDASISMHARQQQAEAEAERQQLKAYVLAYREREES
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaccacagctggtggcgcccagccacggtcaagttgtagacgaagccaagaca
gctgcaccttcacgggatgcagctgatcttgccaaaagtgccgagcgcgaaaagtggcgc
gcttccttgcgcgaggccaaccagcatgtgtggctccatggtccgcatggatctggcgac
aatctcgacgcatcgctcaagcgcaactcggccttcattaagcggctgaagcagaccaac
ttggcagatgccaaagatgcgcttgtcaaggaagtgcaactactgagtctgaccaaatac
ttggacgagcttatacccagcatacctgagattttatggaaggcgacgacgctcaaagac
agatatgcagtcattgagattctgtgtgctttgcatgcccgatttggtggctctgagttt
actgagccgctgctcaaggtgatggagcaggaaatcgtgccgccaccacctaaaagtcag
gatgcctcgaacgagcaggcgcaaaaagaggctgcactagtcgcgcggcagcgatcgttg
cttcgtggcgtcactgaaatggtgctcgtaggcctcgttggccccatgacgctatcggaa
ggtgtgtgcgctccaggtctgaactggttatatgagcagctgcgtaaaatgctgtcccaa
gaccgcgatcttgtatatacgtccgtggcccaggcgatattacgctcttatggctccctg
ctgcttgttcctatggagacgcacgaagccggccagccaggtgtgccgatgggcaagctg
gctgaggacgctgtgatatccgaggctcagagcctcaagttccgcaagctcttcgaggca
tattatgcgatgttggcacgtcgtgctcagcgggaacacgaacaacttcaagagcaagag
cagcgcaatagcgatgcctatatccggtcaggcgtggtgtttgatgatcgtcagtcggcc
tttgagcgccgtgtgagtgatgtgcataccatgatcgaagccatgcatgcgatggctgcg
tcgctgcaagtcgagcttcccgagctgcgcgaatcggacaaggatccgtctgcgccgcgt
tttggagtaaaccttgaagcgacatccacactggcggagatgtcggccaagatggagcag
gagtacgcctctggcaagagtccgtgggaggacgaggagatgcgcaagttttacaaagat
ctgtgccctttggacgagttgcttcccgcctcggtgttggaggcggctgccgcgtcgtcg
gatgagaccgatgcgcgggtgcagcagtccctccagcactcgctagatcgtctgccgacg
atgtgcaatcagggcaccgtcgatgacgtggccatcgaacttggattccagctcaagtcg
atgtcggctcgccgcctgagtgccgcactcctgcatgtgccgaagcaccgctgggatatg
ttaccgtactatgcgaggctgatcgcgacgctgcagccgtaccggccaggcttggcggag
gcggtggtcgagcatctgaaccaaaagttgcggcagcagcaatcgtttcgcaaaccggat
cggcagctgcagagccatctcatcatctacctaggcgagctcaccaagtttggccttgtg
cctgagcacattgtgtttcacttgtacaaggtcctgctggacgacttttcaccgacgtcc
attgagatgctggccctgtccatcgagacatgcggtcgttacttgcaccgcatgcctgcc
acagcagcccgcatgcagcatgtgctggacttgctgcgccgtaagcgcttggcacacaac
ttgtccgagcagcacacgctcctgctcgacaatgcctactacaagtgtgtgccacctgat
cggccgatcgtgacgtaccgcgagccgtcggctatggagcagtttatcacgcatgtgttc
acgcacatgctgggccacggctcgtttgacaggacgcaggcgcttgtcaagatgctgaac
tggagtgacgagtcgattcgtgcccacatctttacgctctttacgtcgccatggctcctg
acgcacgacacactgccactgctggcgcgcttgctgagtcggatccagcagtgccacgag
gcctttgtctgtgaagtgctcgacacactcagcgaggatatcgaggcggatctcttgcac
cttgactttgcggggcatcagcgccgcctggctcgtgtgcggtacctcggtgaatgtcac
gcctgcttcctagtgaaaccggatgcgatgctgcagcagctgtaccgtttgtgcgtgcca
caaccgcagcgcaaggatgcacccaacgactatacgcgcgtgcgaatggcctgcacactt
ttgccttactttgggaaggcattccaaaagccgccgtacaagcagcgcttggatcacgtc
tgtgcggtcctgcagcactacattttatcgaaagatgagcccccggtagaggtcgcgtac
ctgcttcaggattcgttttcgcacctgggtgtgagccgcgatggccgcgtgaatcacaag
cgtctggccaagcggctacgcgaagcgcagccgtaccttgtcaagctcgaccttggaaag
cgtatggcaggcaagcgaccggcccacagaggcgatggcgacaacgacgacgacaacgac
gacgaccacgacgatgaggaggatgacgacgacgacgacgatgaccccgagcgccaagca
gcgcagcaagcggcgctcgacgagcgtgccgaggccgacgtggagcaggagctcgcgatg
ctcatggccgatacgggtgggccaagcgcggcgccgtcgggcatggctctcgagcagacg
cggtcgatgctagcgagggcgcatgtgccgcgtcggcgtcttgaggcgaacgaccagcac
atggtcttttcgctcgtgtcgcggaagcagacgcaagacattcatgtccccacggatgca
tccatatcgatgcatgcgcggcagcagcaggcggaggcggaggcggagcggcagcagctc
aaggcgtacgtgttggcctaccgcgagcgggaagagtcgtag
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