Malassezia restricta: MRET_4268
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Entry
MRET_4268 CDS
T06113
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mrt
Malassezia restricta
Pathway
mrt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MRET_4268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrt03400
]
MRET_4268
DNA repair and recombination proteins [BR:
mrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MRET_4268
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
38741034
NCBI-ProteinID:
XP_027486693
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Position
VIII:379304..382042
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AA seq
912 aa
AA seq
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MSGCMYPTEDARPDAKRDEGFVSYFRRLPPAVPGTVRLFDRQDFYAVYGDDAVRVADIVF
KTQSVVRQLGSKASPLASCTLNMASAKAFLRDALTARQLRIEIWAPTGDRQTWAVARQAS
PGNLQEVEDLLFLQSDVVSSPIVMALRVKMEDGISVIGAAFADATNRHIGVAEYTENDLF
SNSESLIIQLGVKECLVPADDADYHLSKLRALMERCGCVITQVKRGTFTSKSIEEDMQRL
LPASQRAALAPECSKKVAMSSAAALLSYLGLLSDESNFGRYTLKTHDLSEYLRLDHAALR
ALNLFPDESGSVANKNASLFGLLNRCKTAQGVRMLSQWIKQPLVHVHAIQNRQALLQTFL
DEADARQRLQEHFLKWMPDMLRISKRFQRGVATLEDVVRCYQAVGKVPGLRAELAAISMP
SEADRVLFHSTFVAPLDELQHHLSKLVEMVEMTLDLNELAYHNYVIKPDFDDTLRTIRAK
LDTIRDQLDEQHTKAGHDLRLDTEKKLHLENHSSYGYCFRVTRTEAGVIKNRTGYLDLGT
VKGGLYFTTPTLRELNSDFRSLSDEYARTQSRLVRDVIDIAASYAPPLEQLNIVIAHLDV
VVSLAFVSSHAPVPYTRPNVTEGGALILCESRHPCLEAQDEMHFIPNDVRMEPGISDLVV
ITGPNMGGKSTYLRQIGLITLMAQMGCYVPAAEGAQVPVSDCILARVGASDSQLRGISTF
MAEMLETATILKSATPQSLVLIDELGRGTSTYDGFGLAWAISEYIVTQIRCKCVFATHFH
ELTTLAQQQRGVQNLHVVAHVDDQDITLLYKVEPGTSDQSYGIQIAELADFPPSVIRLAK
RKADELEGHAQPVGGADEGAALVDEFVSAYRDRVRDPKRPCTEQEALQSCMNEFDERLRS
NTWVRHLLEHLS
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctgcatgtatccgaccgaagatgcgcggccggacgcaaagcgcgacgaagga
ttcgtgtcgtatttccggcgtcttccgcctgccgtgccaggcactgtgcgcctctttgat
cgacaagacttttacgcggtgtacggcgacgatgctgtgcgtgtagctgatatcgtgttc
aagacccagagcgtggtgcggcaactgggcagcaaggcgtcgcctctcgcctcctgcacg
ctgaatatggcatccgccaaggcgtttctgcgcgatgccctcaccgctcggcagctccgc
attgagatttgggcaccgaccggcgaccgccaaacatgggccgtggctcggcaggcgtcc
ccaggcaacctgcaggaagtcgaagacttgcttttcctgcagtcagatgtcgtgtcaagt
cccattgtcatggctttacgcgtcaagatggaggatggtatctcggtcatcggcgcagcc
tttgcggacgcgaccaatcgacacataggcgtggctgaatacaccgagaacgacctcttt
tctaactcagaatcgctcattatccagctgggcgttaaagagtgcctcgtacctgcagac
gacgctgactatcacctctccaagctccgcgccttgatggagcgctgcggttgtgtgatt
acccaagtcaagcgcggcacatttacgtccaagtcgatcgaagaagacatgcagcgcctc
ctacctgcatcgcagcgtgcagcactcgcacccgaatgcagcaaaaaggtcgccatgtcg
agtgcagcggcactcttatcgtacctcggccttttgagtgacgagtcgaattttgggcgc
tatacgttgaaaacgcacgacctgtccgagtacttgcgtcttgatcatgccgcgctacgg
gctctcaacctctttcccgatgaaagcgggtctgttgcgaacaagaacgccagcctgttt
ggtctgctgaaccgctgcaagacagcgcagggcgtccgtatgctgagccagtggatcaag
cagccactcgtgcatgtgcacgcgatccaaaacagacaagcactcttgcaaacgttcctt
gatgaggcggatgcgcggcagcgcctgcaagagcactttctaaaatggatgccagatatg
ctgcgtattagcaaacgattccagcgtggcgtggcaacactcgaggatgtcgtgcgatgc
taccaggccgtcggcaaggtgcctggcctacgtgcggaacttgctgcgatttctatgcca
tcggaggctgaccgcgtcctctttcacagcacgtttgtggccccgcttgacgagctgcag
caccatctgtccaagcttgttgagatggttgaaatgacgctagacttgaatgaactagcg
taccacaactatgtgatcaagcccgactttgatgatacgctccgcacgatccgcgccaag
ctcgataccatccgtgatcagctcgacgagcagcataccaaggcaggccatgatctgcga
cttgacacggaaaagaagctgcacctcgagaaccactcatcctatggctactgtttccgt
gtgacacgtaccgaggcaggcgtgatcaaaaaccgtactggctacctcgacctgggcacc
gtcaagggtggcctctactttacaacgccgacgctgcgtgaactcaactctgacttccgg
tcgctgtctgacgaatatgctcgcacacaaagtcggctcgtgcgtgatgtaattgacatt
gccgcgtcgtatgcgccgccgctcgaacagctcaatatcgtgatcgctcacctcgatgtg
gtggtgagtctcgcgttcgtatcgagtcatgcgcctgtgccatacacgcggccgaacgtg
acagagggcggcgcactcatactgtgtgaatcacggcacccgtgcctcgaggcgcaggac
gagatgcattttattcccaacgacgtgcgcatggagccaggcatctcggacctagtcgtg
atcactggtccgaacatgggcggaaagtcgacgtatttgcgccagatcgggctcatcacg
ctcatggcacagatgggctgctatgtgccagcagcggaaggcgcccaggtcccggtatcg
gactgtattcttgctcgtgtcggtgcgagtgatagtcaattacgaggcatcagcacattc
atggctgaaatgctcgagacggccacgatcctcaagagtgcaaccccccaatcgctcgtg
ctcattgatgagctcggtcgcggcacgtcgacgtacgatggctttggactcgcctgggcc
atttccgagtatattgtgacgcagattcgctgtaagtgcgtctttgcgacgcacttccat
gagcttacgaccttggcacaacagcagcgtggcgtccagaacctacacgtcgttgcacac
gtcgatgatcaagacattacgctgctgtacaaagtggaaccaggcacgagcgaccagagc
tatggtatccaaatcgccgaactcgccgactttccccccagtgtgattcgtctcgccaag
cgcaaggccgacgagctcgaaggacacgcacagcccgtgggcggtgccgacgagggcgcc
gctctcgtcgacgaattcgtgtccgcatacagagatcgcgtccgtgaccctaaacgaccc
tgcacggagcaggaggcactacagtcttgcatgaacgagtttgacgagcgtctgcggtcc
aatacatgggtgaggcacctcctcgagcacctgagctag
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