Malassezia restricta: MRET_4383
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Entry
MRET_4383 CDS
T06113
Name
(RefSeq) structure-specific recognition protein 1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mrt
Malassezia restricta
Brite
KEGG Orthology (KO) [BR:
mrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mrt03000
]
MRET_4383
03036 Chromosome and associated proteins [BR:
mrt03036
]
MRET_4383
Transcription factors [BR:
mrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
MRET_4383
Chromosome and associated proteins [BR:
mrt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
MRET_4383
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
38741149
NCBI-ProteinID:
XP_027486796
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All DBs
Position
IX:150824..152548
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AA seq
574 aa
AA seq
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MATTQFDNVYHGSGKLLGMIRFSDAGLGWKPLDEGATVTIPAEQMTAFAWLRVARQFQLK
IRLKGTSDQEEGEHVATFENFQRDDHAKLEQVLRECYDKPLETIEVSTRGWNWGAADVDE
HDIRFFVKNKLAFSLPLANIANSNIAGRTEVSMEFINPKDQQPEQNTGAASSADALPFQG
SKKNRPDQLVEMRLYIPGQVERDEAEDEEDEKDVKEEDQELEEEEEGEEEDGEEESAALA
FHNTIKAKADIGQVAGDGILVLKEVLVLTPRGRYDIDMFPSFLRLRGKTYDYKILYSSIT
QLFLLPKPDEVHVLFIVALDPPIRQGQTRYPFLVLQFPREEEMDAELNLDEETIQTKYEG
KLKKRYEEPTFRIVTNLFRVFSQQKVHVPTGFTNSTGQECVRCNVKANDGVLYPLNRGLI
WVSKQPVLISYNDVHQFVFSRVGGAVASAKTFDMRVELSHGVDHTFQSISREELDNLNHF
FAERKLRVKNELTEEAMGIKASVDELLGDDDDEDESGKRRRDDDDDDDEEEDEDFEAESD
DDDGGSPSEGSSDDEDDDAVPDEDDPPKSKKPRT
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggccacgacccagtttgacaacgtgtaccatggcagcggcaagctgctgggtatgatc
cggttctctgatgccgggttaggatggaagccattggatgagggcgcgactgtgaccatt
cccgctgagcagatgacggcctttgcgtggcttcgcgtggcgcgccaatttcagctcaag
atccggctcaaaggcacgtcggaccaggaagagggcgagcatgtcgcgacgtttgaaaac
tttcagcgcgatgaccatgccaagctcgagcaggtactgcgcgagtgctatgacaagccg
ctcgagacgattgaggtatcgacgcgcggttggaattggggcgccgctgatgtcgatgaa
cacgatatccggttctttgtgaagaataagctggcattttcgttgccgcttgcgaatatt
gcgaacagcaacattgccggccgtacggaagtcagcatggagtttatcaaccccaaggac
cagcagcctgagcaaaacaccggtgctgcgtcgagtgccgatgccctgcccttccaggga
tcgaagaagaaccggcctgatcagctcgttgagatgcgcctctacattcccggacaagta
gagcgtgacgaggcggaggacgaggaggacgagaaggacgtcaaggaggaagaccaggaa
cttgaagaagaagaagaaggcgaggaagaagacggcgaagaggagagtgctgcgctggcc
ttccacaataccatcaaagccaaggccgatatcggacaggtggccggcgatggcattctc
gtgctcaaagaagttttggttcttacgccgcgtggccgctacgatatcgacatgttccct
tcctttttgcgcctgcgcggcaagacgtacgactacaagattctttacagttccatcacg
cagctattcctcctgcccaagccagacgaagtgcatgtcctgtttattgtggcgctggat
ccgccgattcgacaaggccagacgcggtacccgttccttgtgctacagttcccacgcgaa
gaggaaatggacgccgagctcaatctcgacgaagagacgatccagaccaagtacgagggc
aagctcaagaagcggtacgaggagccaaccttccgcatcgtcacgaatcttttccgcgta
ttctcccagcaaaaagtacacgtgcctacaggctttaccaacagcacgggtcaggaatgc
gtgcgttgcaatgtcaaggcgaacgatggtgtgctatacccactcaaccgcgggcttatc
tgggtatccaagcagcctgtcctcatttcgtacaatgacgtgcaccaattcgtgttcagt
cgcgtaggcggcgctgtggcgtcggccaagacgtttgatatgcgcgtggaattgtcgcac
ggcgtcgatcatacgttccagtccatcagccgagaagaactcgataacctcaaccacttt
ttcgcggaacgcaaactgcgtgtcaagaacgagctcaccgaggaggcgatgggcatcaaa
gcatccgtggacgagctactgggtgacgatgatgacgaagatgagtccggcaagcgccgt
cgcgatgacgacgacgacgatgacgaagaagaagacgaagactttgaggccgagtcagat
gacgacgacggtggcagtccatccgaaggctcgagtgacgacgaagacgacgacgccgtg
ccggacgaagacgacccacccaagtcgaaaaagccccggacatag
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