Methanospirillum purgamenti: KHC33_00220
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Entry
KHC33_00220 CDS
T07306
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mrtj
Methanospirillum purgamenti
Pathway
mrtj03410
Base excision repair
mrtj03430
Mismatch repair
mrtj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrtj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KHC33_00220
03430 Mismatch repair
KHC33_00220
03440 Homologous recombination
KHC33_00220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrtj03400
]
KHC33_00220
DNA repair and recombination proteins [BR:
mrtj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KHC33_00220
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KHC33_00220
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KHC33_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
QVV89003
UniProt:
A0A8E7B0S9
LinkDB
All DBs
Position
complement(47021..48247)
Genome browser
AA seq
408 aa
AA seq
DB search
MSIDTAAKDLANELLRQRYVEVLCHHDADGIAAGSIMAMALYRASIPFRLRITPRLSEKN
LPKTKPLLLCDLGSGLTELPEDTMVIDHHLSFFEGPYHVNPRLDGINGDKDLSAAGAAYL
VANALGDNRDLAGLILLGIIGDNQTLTGKNQEIYREALGNGIISKKRGITLPGRNPAEQI
ELATKPFLNGLSGSEEESKNLIQEVSSGDTLQKDLLCSLLVLQASEICRTETLSSIWGDV
WVLEREVVEHAQDMAFVVDSCGKAGAGSTAVSLCLRSSKLTEKAFGVARSHRKALIHEMN
QFLTIPPSDATTPVLCSNQHLASDLADTIFHNIPLSFPVIVAVKKDDGSCSCSIRSNPKS
GIILGEVVHDIAQEFGGHGGGHQSRAGATFACEHLDKFVSGIAEVCGS
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtccattgatactgctgcaaaagatcttgcaaatgagttattaagacagagatacgtt
gaagtgctctgtcaccatgatgcagatggtattgcagcaggatcgatcatggcaatggca
ctataccgagccagcatcccattcagactccggataaccccccggttatctgaaaaaaac
ctcccgaaaacaaagcctcttttattatgtgatcttggatcaggtcttacagaactgcct
gaggatactatggtcattgatcatcatctgtcattttttgaggggccataccatgtcaat
ccaagacttgacggaatcaatggtgataaggatttaagtgcagcaggtgctgcctatctt
gttgcaaatgccctgggagataacagagatcttgcaggtctcatccttcttgggattatc
ggggacaatcagactcttaccggaaaaaaccaggaaatttaccgtgaagcccttggaaac
gggataatcagtaaaaaaagaggcattactcttcctggcagaaatccagccgaacaaata
gagcttgcaacaaaaccctttctcaacggattgtcaggatcagaagaagagtctaaaaac
ctgatccaagaggtttcatcaggagataccctccagaaagatctcctctgttcactcctg
gttcttcaggcttcagaaatctgccggacagaaacgttgagttctatatggggagatgta
tgggtattagagcgtgaagttgttgaacacgcgcaggatatggcatttgttgttgattca
tgtggaaaagcaggtgcagggagtacagctgtatccctttgtctgcgttcatctaaactg
actgaaaaagcctttggtgtggcccgatcacatcggaaggccttgattcatgagatgaac
cagtttcttaccataccaccatcagatgccaccacacctgttttatgctcaaatcaacac
ctcgccagtgatcttgctgacacaatcttccataatatccctctttcatttcctgtcatt
gtcgcagtgaagaaagatgatggcagttgttcctgttccatcagatcaaatccaaaaagt
ggaataattctaggagaggtagtccatgacatcgctcaggaatttggtggtcatggtgga
ggtcatcaaagtcgggctggagcaacattcgcttgtgaacatctggataaattcgtttca
ggaatagcagaggtttgtgggtcatga
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