Methanospirillum purgamenti: KHC33_05325
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Entry
KHC33_05325 CDS
T07306
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mrtj
Methanospirillum purgamenti
Pathway
mrtj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mrtj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KHC33_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrtj03019
]
KHC33_05325
03009 Ribosome biogenesis [BR:
mrtj03009
]
KHC33_05325
Enzymes [BR:
mrtj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KHC33_05325
Messenger RNA biogenesis [BR:
mrtj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KHC33_05325
Ribosome biogenesis [BR:
mrtj03009
]
Prokaryotic type
rRNA helicases
KHC33_05325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QVV89922
UniProt:
A0A8E7EIA7
LinkDB
All DBs
Position
complement(1094651..1096246)
Genome browser
AA seq
531 aa
AA seq
DB search
MEIPSFSDLQLSPGILKAIRDIGYEEPTPIQSQVIPLILAGNDVAGQAYTGTGKTASYGI
PALEMCQPANRKVQTIILCPTRELAVQVGTELNRLAMHRKGISILPVYGGQPIERQLKAL
SRGVHIVIGTPGRVIDHIKRGTLTLDSVSLVVMDEADQMLDMGFRDDIEEILSHIPKEHQ
TVILSATFPSEILDISRRFQKDPIDVKMVHQELTVPQIEQYYIEVREPAKSDTLIRVLEF
YQPQRTIIFCNTQIAVDAVSSALKAEGFMADGLHGGMAQAQRDKVMNAFRKGQLEILIAT
DVAARGIDVEEIDLVCNYDFPQDDEYYVHRIGRTARAGRTGRAISFVSPRERYRLRDVRR
STRAEPEPLPIPTLREIGGKKAITTLADADSLMNTGDLSFCRPMIEEKIAGGADPIALAA
SLLMIAAGIGTEKEDELEKYLGEQAVVRLSAGRQDGILVRDILQVVRNSGRNIQNDIGNI
RIGQTATYIDVPEPSVKDVIDVLNGAQIGRIRLVAKRGRKQSDIPKRRFTK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggaaataccttctttttcagacctccagctttcacctggaatccttaaagccatccgt
gatatcggatatgaagaaccaaccccaatacagtctcaagttatcccattaattctcgcc
ggcaacgatgttgcaggacaggcctataccggaactggtaaaaccgcatcatatggtatt
cctgcactcgagatgtgtcagcctgcaaatcggaaagttcagaccatcatcctctgtcca
accagagaacttgctgtgcaggtaggaactgaactgaacagactggcaatgcatcggaaa
ggaatctcaatccttccggtatatggtggtcagccaattgaacgacaactcaaggctctc
tcccgcggggttcatatcgttatcggaactccgggaagagtgatcgatcacattaaacgg
ggaactctgacccttgattcggtttcactggtcgtaatggacgaggcagatcagatgctt
gatatgggattccgtgatgatatagaagaaatactctcccacataccaaaagagcatcag
actgtcattctctcagccacattcccctctgaaatcctcgatatctcccgtcgtttccag
aaagatccgattgatgtcaagatggttcaccaggaactgaccgttccacaaattgaacag
tattatattgaagtcagggaaccggcaaagtcagacacccttatcagagtccttgagttt
taccagccacaacggaccatcatcttttgtaacacccagattgccgtagacgcagtatca
agcgctctcaaggcagaaggattcatggctgacggtcttcatggcggtatggcacaggcc
cagcgtgacaaagtcatgaatgcattccggaaagggcaactcgaaattctgattgcaact
gatgtggctgcccgtggaattgacgttgaagagattgaccttgtctgcaactacgacttt
ccccaggatgatgaatattatgtgcaccggatcggccggacagcacgtgcaggacgaacc
ggccgtgcaatcagttttgtaagtccccgggaacggtacagactccgggatgtcagacgg
agcacacgagccgaacctgaaccactccccattccgacccttcgagaaatcggaggcaag
aaagccatcaccacccttgctgatgcagattcactcatgaacaccggggatctctcattc
tgtcgcccgatgatagaggagaagattgcaggaggcgctgatccaattgcccttgcagca
tccctgcttatgattgcagccggcatcggaactgaaaaagaagacgaacttgagaaatat
cttggagaacaggcagttgtcaggctttcagcaggtcggcaggatggcattctggtcagg
gatattctccaggttgtcagaaacagtggtagaaatattcagaacgatattggaaacatc
cggattggacagactgccacctacattgatgttcctgaaccctcggtcaaggatgtcatt
gatgtcctgaacggtgcccagataggaagaatcaggcttgttgcaaaaagaggaagaaag
cagtctgatattccaaaaagacgctttactaaataa
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