Methanospirillum purgamenti: KHC33_09250
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Entry
KHC33_09250 CDS
T07306
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mrtj
Methanospirillum purgamenti
Pathway
mrtj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mrtj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KHC33_09250 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mrtj03400
]
KHC33_09250 (ruvB)
Enzymes [BR:
mrtj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KHC33_09250 (ruvB)
DNA repair and recombination proteins [BR:
mrtj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KHC33_09250 (ruvB)
RecFOR pathway proteins
KHC33_09250 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
nSTAND3
AAA_3
MCM
RNA_helicase
AAA_16
NTPase_1
AAA_14
TsaE
DUF815
Rad17
NB-ARC
NACHT
bpMoxR
AAA_28
AAA_18
Torsin
Bac_DnaA
PaRep2b
Zeta_toxin
ABC_tran
IstB_IS21
NPHP3_N
AAA_19
AAA_17
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QVV87556
UniProt:
A0A8E7EII0
LinkDB
All DBs
Position
complement(1935877..1936890)
Genome browser
AA seq
337 aa
AA seq
DB search
MQTRFVSPVNRDEDTEEPSVRPGYLQDFVGQEAVKDALMVAITSAIKRKKPLDHILFSGP
PGLGKTTLAHIIAQEMSAGIETTSGPVLDRPGDLAALLTPLKDHDILFIDEIHRLSPVIE
EILYPAMEDYTIDLLIGEGPSARTIQLPLERYTLVGATTRLGLLGSPFRDRFGIILRLDL
YDPADLQIIITRSAGILAIPITHEGAEEIAMRSRGTPRIANRLLRRVYDYAIVRGSGSID
KEIANSALFALGVDKKGLDVLDRRILEVIAHDFGGGPVGLKTISISVGEEPRTIEDVYEP
YLIRIGFLKRTPQGRIITPSGSEHMSSVITQNFSSCS
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgagatttgtaagcccagtgaatcgagatgaagatactgaagagccatcagtc
agacctggatatcttcaagattttgtcggacaagaagcagtgaaagatgcgttgatggtt
gctatcacatctgctatcaaacgcaaaaaacctcttgatcatattctgttttcaggcccg
ccagggctcggaaagacaacactggctcacatcattgcgcaggaaatgtcagcaggtatt
gaaacaacgagtggtccggtgcttgatcggccaggagatcttgcagcgcttctaactccg
ttaaaagaccatgacatcctttttattgatgaaatccaccgactctcacctgtcatcgag
gagattctctatccggcgatggaagattacacaatcgatctcctcataggagagggaccg
tctgcccgtacgattcaactccctctcgagcggtatacgttggttggagcaacaacaaga
cttggtcttctgggatctccattcagagatcggtttggaattattcttcgtctggattta
tacgatcccgcagatttacaaattatcatcacgaggtctgctggtattttagctattccc
ataactcatgaaggggcagaagagattgccatgagatctcgtggaacaccacggatagca
aaccgtctgttaagaagggtttatgattatgcaatagtcagaggatctggttcaatagac
aaagaaattgcaaactcagctctttttgcccttggagtcgataaaaagggactggatgtc
ttggatagacgaattctagaagttattgcacatgattttggtggaggaccggttggtctg
aaaactatctcaatttctgttggagaggaaccaagaacaatagaagatgtgtacgaacca
tatcttataagaattggttttcttaaacgaacaccacaaggaagaataatcactccttca
ggaagtgaacatatgagttcagttatcacgcagaatttttcatcttgttcctga
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