Methanospirillum purgamenti: KHC33_09530
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Entry
KHC33_09530 CDS
T07306
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mrtj
Methanospirillum purgamenti
Pathway
mrtj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mrtj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KHC33_09530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mrtj03019
]
KHC33_09530
03009 Ribosome biogenesis [BR:
mrtj03009
]
KHC33_09530
04131 Membrane trafficking [BR:
mrtj04131
]
KHC33_09530
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mrtj04147
]
KHC33_09530
Messenger RNA biogenesis [BR:
mrtj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
KHC33_09530
Ribosome biogenesis [BR:
mrtj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
KHC33_09530
Membrane trafficking [BR:
mrtj04131
]
SNARE
SNARE associated proteins
Others
KHC33_09530
Autophagy
Aggrephagy
Other aggrephagy associated proteins
KHC33_09530
Exosome [BR:
mrtj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KHC33_09530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
CDC48_2
RuvB_N
TIP49
AAA_5
AAA_2
AAA_14
AAA_22
AAA_33
nSTAND3
AAA_28
AAA_18
Mg_chelatase
RNA_helicase
AAA_7
IstB_IS21
Sigma54_activat
ATPase
AAA_24
Parvo_NS1
NPHP3_N
PhoH
AAA_17
Zeta_toxin
ABC_tran
AAA_3
AAA_25
AAA_19
TsaE
DUF5906
bpMoxR
NB-ARC
DUF815
ATPase_2
NACHT
Cytidylate_kin2
AAA_lid_PRS2_C
DUF6017
Motif
Other DBs
NCBI-ProteinID:
QVV87607
UniProt:
A0A8E7AU59
LinkDB
All DBs
Position
1990326..1992740
Genome browser
AA seq
804 aa
AA seq
DB search
MTVKSGIRLEVRRAAEEDAGKGLARIHPAVMRALGIVNGEFIEILGGKRAVAAAWSSQSV
SQGRNDIAIDGEIRSNAGCGIDDRVIVRRVIVHDVRKVVLQPVTNISLNNPELLLAKKLR
GRPIIEGQTVRIDLIGNTVTFVVASIEPRGTGVVTFTTEVILHDTPYRTEEKKSEELSIH
YEDIGGLSREISLIREMIEIPLRYPQIFERLGIDSPKGVLLYGPPGTGKTLLARAVASEV
DAHFIPLSGPEVMSRYYGDSEKKIREIFEEARQKAPSIIFIDEIDSIATKRQDTTGEVER
RVTAQILTMMDGLASRGQVVVIAATNMPDSIDPALRRGGRFDREIEIGIPDRIGRLEIYH
VHTRTMPLADDVDLEYYAETSYGFVGADIALHCKEAAMHALRGIMGRMKEDQEVPAEVID
SLMITNLDFQEARKGIEPSAMRELYIEIPEVPWEMVEGLDAEKHEIEKIIEWPVHRRDAF
EKLKIKPPKGILLFGPPGTGKTLIAKAVAAKSRMNFISVKGPELLSKWVGESEKQVREAF
RKARQSAPSIIFFDEIDALVQKRGQEHGGSSRVGESVLSQILTEMDGVEDLSGVVIMAAT
NRPDLLDPALLRPGRLEKHIYIKPPDQKGRKSILQLYLKDLSSLLDEDIDYDEMAQEMKY
FVGADISAFVREVKMNLLDDIFTKPKKPDDVPKISSDYLKDILSRQQGTLDNQNLEIFES
GAWALLFPRSKQQILLRSAYILKQVERAGLITELSPDLNERATALRDMTFWQDKDFSKIE
EHTNQVEEALHKQINKNKPFINSS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaaaatcaggaatcagacttgaagttcgccgtgctgcagaagaagacgcagga
aaggggcttgctcggattcatccggcagtgatgcgggctctcgggatagtaaatggtgag
tttattgagattcttggaggaaagcgggccgtagcagctgcatggagttcccagagtgtg
tcacaaggcaggaatgacattgcaatagatggcgagattcgaagtaatgccggatgtggg
attgatgaccgggtaattgttcgaagagtaattgtgcatgatgtcagaaaagtagtcctg
caaccagtcacgaatatttctcttaataatcctgaactactactcgctaaaaaactcagg
ggcagaccgatcatagaaggacaaaccgtcagaattgatctgattggaaatacagttaca
tttgttgttgcttctatcgagcccaggggtaccggggttgtaacatttacaacggaggtt
atccttcatgatacaccataccggacagaagagaaaaagtcagaagaactctcaatccat
tatgaagatataggtggattatcccgggagattagtcttatcagggaaatgattgagata
cctcttcggtatccacaaatatttgaacgtcttggtattgattcaccaaaaggggtctta
ctatatgggcctccaggaactggcaaaactctccttgcacgggcagtagcaagtgaagtg
gatgcgcatttcattccgttatcaggtcctgaggtgatgagcagatattatggagattct
gaaaagaaaatccgggaaattttcgaagaagccagacaaaaagctccttcaataattttt
atcgatgaaattgattctatagctaccaaacggcaggatacaaccggagaagttgagcgg
agagtaactgctcagattcttacgatgatggatggtcttgccagtcgtggtcaggtcgtt
gtcattgctgcaacgaatatgcctgactctatcgatcccgcacttcgtcgcggaggacgg
tttgaccgggagatagaaattggcataccagaccgtattggcagacttgaaatttaccat
gttcatacccgtaccatgccccttgctgatgatgtagacctcgaatattatgctgaaact
agttatggatttgtcggggcagatatcgcgctgcattgcaaagaagcagctatgcatgct
ttacgaggaattatgggtcggatgaaagaggatcaggaagttccagctgaagttattgat
tctctcatgatcacgaacttggattttcaagaggccagaaaaggaatagaaccttctgcc
atgcgtgaactgtacatagaaataccagaagtaccttgggagatggtagaaggactagat
gctgaaaaacatgagattgaaaaaattattgaatggccggttcacaggcgggatgctttt
gaaaaattaaaaataaaacccccaaagggaattctgctatttggtccgcccggaactgga
aaaactctgattgcaaaggcagttgctgccaaatccagaatgaattttatctccgtaaag
gggcccgaacttctttccaagtgggttggtgagtctgaaaaacaggttagagaagctttc
agaaaagccagacagtcagctccttcaattatcttttttgatgagattgatgcactggtt
cagaagcgtggtcaggaacatggtggaagttctcgagtcggagaaagtgtcttatctcaa
atccttaccgagatggatggtgtggaagacttatctggtgtagtaattatggcagcaacg
aaccggcccgatcttcttgaccccgcccttcttcggccaggaaggcttgaaaaacatatt
tacatcaaacctccggatcaaaaaggaaggaaatcaattttacaattatacctaaaagat
ctctcatctcttctggatgaggatattgactatgatgaaatggcacaggaaatgaaatat
tttgtaggagcagatatcagtgcttttgtcagggaagtaaagatgaatctcctcgatgat
atattcacgaaaccgaaaaaacctgatgatgttccaaaaatttcatccgattatctaaaa
gacattttatcacgtcaacaagggacacttgataatcaaaaccttgagatatttgaatct
ggtgcatgggcattactatttcccagaagtaagcaacagatcctcctccgctctgcttat
attctcaaacaggtagaacgagccggattaattacagaactctcaccagatctaaatgaa
cgtgccaccgcacttcgggatatgacattctggcaagataaggatttttccaaaattgag
gaacatacaaatcaggtcgaagaagctttgcataaacaaatcaataaaaacaaaccgttt
attaattcatcataa
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