Methanobrevibacter ruminantium: mru_0109
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Entry
mru_0109 CDS
T01166
Symbol
rfbC1
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RfbC1
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru00521
Streptomycin biosynthesis
mru00523
Polyketide sugar unit biosynthesis
mru00541
Biosynthesis of various nucleotide sugars
mru01100
Metabolic pathways
mru01110
Biosynthesis of secondary metabolites
mru01250
Biosynthesis of nucleotide sugars
Module
mru_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
mru_0109 (rfbC1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
mru_0109 (rfbC1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
mru_0109 (rfbC1)
Enzymes [BR:
mru01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
mru_0109 (rfbC1)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ADC45961
UniProt:
D3DYP1
LinkDB
All DBs
Position
215878..216456
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AA seq
192 aa
AA seq
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MGKFNIIKSEIEGVFTVEPTVFEDERGYFMETYNENDFKAEGIDLTFVQDNQSKSSKGVL
RGLHFQYTQPQGKLVRVIKGEVFDVGVDLRKDSPTYGKWMGEILSEENKKQLFIPKGFAH
GFLVLSDEAEFVYKCTDFYKGDDEGGIQWNDPDIGIEWPLGDLKEEDLILSEKDKLLKPM
KDTPTDFYMEDE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtttaatataattaaaagtgaaattgaaggtgtatttacagttgaacctacc
gtttttgaagatgaacggggctactttatggaaacttataatgagaatgactttaaggca
gaggggattgatttaacctttgttcaagacaatcaatcaaagtcatcaaaaggagtactt
agaggcctccatttccaatacacacagccacaaggaaagctggttcgtgtaataaaggga
gaagtcttcgatgtgggagtggatcttagaaaagactcacctacatatggaaaatggatg
ggggaaatactctctgaagaaaacaaaaaacagttatttataccaaaaggatttgcccat
ggctttttagtattatcagatgaagcagaattcgtttacaagtgtacagacttctataaa
ggagatgatgagggaggaatccaatggaacgaccctgatataggaatcgaatggccattg
ggagaccttaaggaagaggatctgattctatctgaaaaggacaagctattgaagccaatg
aaagacactccaactgatttctatatggaagatgaatga
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