Methanobrevibacter ruminantium: mru_0197
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Entry
mru_0197 CDS
T01166
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mru
Methanobrevibacter ruminantium
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mru03016
]
mru_0197 (truD)
Enzymes [BR:
mru01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
mru_0197 (truD)
Transfer RNA biogenesis [BR:
mru03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
mru_0197 (truD)
Prokaryotic type
mru_0197 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SIMPL
Motif
Other DBs
NCBI-ProteinID:
ADC46049
UniProt:
D3DZ94
LinkDB
All DBs
Position
319509..320867
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AA seq
452 aa
AA seq
DB search
MLNANTYVTEEEGIGGTIRNRWEDFYVEEIPEVIPDGEGPNIYIWIEKLGRTTLDVLLDI
ARDLHIDRKRMGFAGMKDKKAITRQWICIANMDSEEQFAQVEALAGTIHNTEFLKVIRGR
KKLRMGQLKGNKFRILVKDIDGMESDNEETRKLAIEDAAKRADAILKTLEKTGVPNYFGW
QRFGKPRTNTHLVGEALIHNDLKEAVRRYIGNPSEEESEDSRKARQAFDDGNWEESLELM
HPGMRYEKMMLKVLLKEKRRAIRKIAEEEGIEIEEVDESKVELSDKAYKNAIHALPKPLQ
RMFVHAYQSFLFNAAVSERVAMGMDKYIEGDIVIDKEERIVRDKTPEEFQEMVSSFEINQ
TCPLYGTKVPFAGGEVGKMEEEILNSYGLTRDDFEVPKMPRLGSHGLRRSMRFQVWDASA
TATEDGVMCEFSIDKGSYATAVLREVMKKDVY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatgcaaacacttatgtaacagaggaagaaggtatcggcggaactataagaaac
agatgggaagacttctatgttgaagagattccggaagtaattccagatggagaaggtcca
aacatttatatttggattgaaaaattaggaagaaccacccttgacgttttgcttgatatt
gcaagagacctccatatagacaggaaaagaatgggctttgctggaatgaaagataaaaag
gccatcactcgccaatggatctgcatagcgaatatggattcagaggaacagtttgcacaa
gttgaggcattagcaggcacaattcataatactgaatttttaaaagtaattagaggtcga
aaaaagttaagaatgggtcagcttaaaggaaataagtttagaattcttgttaaggatatt
gatggcatggaatcagataacgaagaaactcgtaaattagccattgaagatgctgcaaaa
agagcagatgccatcttaaaaaccttggagaagactggagttcctaactactttggctgg
caaagatttggaaagccaagaacaaatactcatttggttggagaggctcttattcataat
gatttaaaagaggctgtcagacgttatattggaaatcctagcgaagaagaaagtgaagat
tcaagaaaagcccgacaagcctttgatgatggaaattgggaagaatcccttgaattgatg
catcctggaatgcgctatgagaagatgatgttgaaagtgcttttaaaagaaaaaagaaga
gcaatcaggaagattgcagaggaagaaggaattgaaattgaagaagtagatgaatccaaa
gtggaattatcagataaggcttataaaaatgctattcatgcacttccaaagccacttcaa
agaatgtttgtccatgcttatcagtcattcctattcaatgctgcagtaagtgagcgtgta
gcaatgggtatggataaatatatcgaaggagatattgtcattgataaggaagagagaatt
gtaagagataagactcctgaggagtttcaggaaatggtatcttcctttgaaataaatcag
acttgccctttgtatggtacaaaggttccatttgcaggtggagaagttggcaagatggaa
gaggaaatcttaaacagctatggattgactagagatgactttgaagtacctaaaatgcct
cgtttaggaagccatggtcttagaaggtctatgagattccaggtatgggatgcaagtgca
acagcaactgaagatggtgttatgtgtgagttttccattgataagggatcatatgctact
gctgttcttagggaagttatgaagaaggatgtttactag
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