Methanobrevibacter ruminantium: mru_0908
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Entry
mru_0908 CDS
T01166
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D RpoD
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
mru
Methanobrevibacter ruminantium
Pathway
mru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
mru_0908 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mru03021
]
mru_0908 (rpoD)
Enzymes [BR:
mru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
mru_0908 (rpoD)
Transcription machinery [BR:
mru03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
mru_0908 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADC46759
UniProt:
D3E2J8
LinkDB
All DBs
Position
1162638..1163486
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AA seq
282 aa
AA seq
DB search
MEIDVKKQDENSMVFIVRDAEVPFINAIRRIAMMRVPKLAIEDVFIVKNDSAMFDEVLAH
RLGLTPLVSDLESIEGLVMREDCDCNHDENGNYVDKGEYCPRCSVSFSLNETGPKVVYSR
DLKSCGDSRIKPVYDTIPLLKLKEDQDVELEAVAKLGIGKEHAKWVPTTVCAYKQYPEIT
FNEGEDVVYQVADACPRNVLDANRDDGVIEVIDIENCSLCKTCVRTAKAAGSKFINVGYR
ENDFIFKIETDGSMPPKEVLLKACDVLDAKTDEFITFSEGGS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgatgtcaaaaaacaagatgaaaattctatggttttcatagtccgtgatgca
gaagtgccttttatcaatgcaatcagaagaatcgcaatgatgagagtaccaaaattagct
atcgaagatgtatttattgtaaaaaacgattctgctatgtttgatgaagtgttagctcac
agattaggattgactcctttggtttctgatttggaatcaattgaaggattagtcatgaga
gaagattgtgactgcaaccatgatgaaaatggaaactatgtggataagggtgaatactgc
cctagatgtagcgtatccttttcattaaatgaaaccggaccaaaagtagtttattcaagg
gatttaaaatcttgtggtgactcaaggattaaaccagtatacgataccatacctcttttg
aagttaaaagaggatcaagatgttgaattggaagctgtagcaaagttaggaatcggaaag
gaacatgcaaaatgggttcctacaacagtttgcgcatataagcaatatccggaaatcact
ttcaatgaaggtgaagatgtggtctatcaagttgctgatgcatgcccaaggaatgtgttg
gatgcaaacagggacgatggagtcattgaagtcattgatattgaaaactgttcattatgt
aagacttgcgtaaggacagctaaggcagcaggttctaaattcatcaatgttggatatcgt
gaaaatgattttatttttaaaattgaaactgatggatcaatgcctcctaaagaggtttta
ttaaaagcttgtgatgttttggatgctaaaacagacgagtttatcacatttagtgaagga
ggaagctaa
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